Factsheet for Bra004937.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009499.1-P
Bra014106.1-P
Bra018081.1-P
Bra025315.1-P
Bra028809.1-P
Bra033769.1-P
Bra035669.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45770.1	Bra035669.1-P	AT2G28800.1	14517205
AT2G45770.1	Bra014106.1-P	AT2G47450.1	14517205
AT2G45770.1	Bra025315.1-P	AT3G27960.1	21798944
AT2G45770.1	Bra018081.1-P	AT3G48150.1	21798944
AT2G45770.1	Bra033769.1-P	AT3G48150.1	21798944
AT2G45770.1	Bra009499.1-P	AT5G03940.1	14517205
AT2G45770.1	Bra028809.1-P	AT5G03940.1	14517205

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74765	Canola	plastid	99.46	99.46
CDY18901	Canola	plastid	96.47	98.34
AT2G45770.1	Thale cress	plastid	94.02	94.54
Bra039315.1-P	Field mustard	plastid	78.53	91.75
VIT_15s0048g02080.t01	Wine grape	plastid	82.07	82.29
KRH48224	Soybean	plastid	78.53	77.69
KRH65131	Soybean	plastid	78.53	77.69
Solyc01g091580.2.1	Tomato	plastid	76.63	76.63
PGSC0003DMT400071384	Potato	plastid	76.09	76.09
TraesCSU01G058200.1	Wheat	plastid	72.83	74.44
TraesCS3A01G498300.1	Wheat	plastid	72.55	74.37
GSMUA_Achr11P...	Banana	plastid	77.17	74.35
TraesCS3B01G561300.1	Wheat	plastid	72.01	74.23
EES04254	Sorghum	plastid	73.1	73.5
Os01t0958100-01	Rice	plastid	72.01	73.0
HORVU3Hr1G110160.4	Barley	mitochondrion	72.55	66.92
Zm00001d042044_P001	Maize	plastid	72.28	62.0
Bra026145.1-P	Field mustard	cytosol	23.1	17.75
Bra028809.1-P	Field mustard	plastid	26.09	17.02
Bra009499.1-P	Field mustard	plastid	25.82	16.78
Bra018760.1-P	Field mustard	cytosol	22.55	16.77
Bra014161.1-P	Field mustard	cytosol	22.55	16.73
Bra024060.1-P	Field mustard	cytosol, endoplasmic reticulum	26.9	16.12
Bra011203.1-P	Field mustard	endoplasmic reticulum	26.09	15.43
Bra014039.1-P	Field mustard	cytosol	16.3	14.6
Bra014811.1-P	Field mustard	cytosol, endoplasmic reticulum	19.84	13.85

Protein Annotations

Gene3D:1.20.120.140	MapMan:23.1.7.4	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	EnsemblPlantsGene:Bra004937	EnsemblPlants:Bra004937.1
EnsemblPlants:Bra004937.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006614	GO:GO:0006810	GO:GO:0008150	UniProt:M4CL51
InterPro:P-loop_NTPase	PFAM:PF00448	PFAM:PF02881	ScanProsite:PS00300	PANTHER:PTHR43134	PANTHER:PTHR43134:SF2
SMART:SM00382	SMART:SM00962	SMART:SM00963	InterPro:SRP/SRP_N	InterPro:SRP54_GTPase_dom	InterPro:SR_rcpt_FtsY
SUPFAM:SSF47364	SUPFAM:SSF52540	InterPro:Signal_recog_particl_SRP54_hlx	TIGRFAMs:TIGR00064	UniParc:UPI0002547FF9	:

Description

AT2G45770 (E=3e-190) CPFTSY, FRD4 | CPFTSY; 7S RNA binding / GTP binding / nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA05:+:2569087..2571370

Molecular Weight (calculated)

39856.3 Da

IEP (calculated)

8.470

GRAVY (calculated)

-0.070

Length

368 amino acids

Sequence
(BLAST)

001: MASPSSAHLS FLAGRTSPHF SSERLRLSPY RRELRPPNPK FRCSAGQSGF FTRLGRLIKE KAKSDVEKVF SGFSKTRENL AVIDELLLFW NLAETDRVLD
101: ELEEALLVSD FGPKITVRIV ERLRDDIMSG KLKSGSEIKD ALKGSVLEML AKKNSKTELQ LGFRKPAVVM IVGVNGGGKT TSLGKLAHRL KNEGTKVLMA
201: AGDTFRAAAS DQLEIWAERT GCEIVVAEGE KAKAATVLSK AVKRGKEEGY DVVLCDTSGR LHTNYSLMEE LIACKKAVGK VVSGAPNEIL LVLDGNTGLN
301: MLPQAREFNE VVGITGLILT KLDGSARGGC VVSVVEELGI PVKFIGVGEA VEDLQPFDSE AFVNAIFS

Best Arabidopsis Sequence Match ( AT2G45770.1 )
(BLAST)

001: MATSSAHLSF LAGRISPFSS ERIGLFPLRG EFRPRMTRFR CSAGPSGFFT RLGRLIKEKA KSDVEKVFSG FSKTRENLAV IDELLLFWNL AETDRVLDEL
101: EEALLVSDFG PKITVRIVER LREDIMSGKL KSGSEIKDAL KESVLEMLAK KNSKTELQLG FRKPAVIMIV GVNGGGKTTS LGKLAHRLKN EGTKVLMAAG
201: DTFRAAASDQ LEIWAERTGC EIVVAEGDKA KAATVLSKAV KRGKEEGYDV VLCDTSGRLH TNYSLMEELI ACKKAVGKIV SGAPNEILLV LDGNTGLNML
301: PQAREFNEVV GITGLILTKL DGSARGGCVV SVVEELGIPV KFIGVGEAVE DLQPFDPEAF VNAIFS

Arabidopsis Description

CPFTSYCell division protein FtsY homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80842]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.