Factsheet for Bra039315.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009499.1-P
Bra014106.1-P
Bra018081.1-P
Bra025315.1-P
Bra028809.1-P
Bra033769.1-P
Bra035669.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45770.1	Bra035669.1-P	AT2G28800.1	14517205
AT2G45770.1	Bra014106.1-P	AT2G47450.1	14517205
AT2G45770.1	Bra025315.1-P	AT3G27960.1	21798944
AT2G45770.1	Bra018081.1-P	AT3G48150.1	21798944
AT2G45770.1	Bra033769.1-P	AT3G48150.1	21798944
AT2G45770.1	Bra009499.1-P	AT5G03940.1	14517205
AT2G45770.1	Bra028809.1-P	AT5G03940.1	14517205

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37064	Canola	plastid	98.73	84.51
CDY27360	Canola	plastid	97.14	83.38
Bra004937.1-P	Field mustard	plastid	91.75	78.53
AT2G45770.1	Thale cress	plastid	91.11	78.42
VIT_15s0048g02080.t01	Wine grape	plastid	78.73	67.57
KRH65131	Soybean	plastid	78.1	66.13
KRH48224	Soybean	plastid	77.46	65.59
PGSC0003DMT400071384	Potato	plastid	75.87	64.95
Solyc01g091580.2.1	Tomato	plastid	75.24	64.4
TraesCSU01G058200.1	Wheat	plastid	72.06	63.06
TraesCS3B01G561300.1	Wheat	plastid	71.11	62.75
TraesCS3A01G498300.1	Wheat	plastid	71.43	62.67
GSMUA_Achr11P...	Banana	plastid	74.6	61.52
Os01t0958100-01	Rice	plastid	70.48	61.16
EES04254	Sorghum	plastid	70.79	60.93
HORVU3Hr1G110160.4	Barley	mitochondrion	72.06	56.89
Zm00001d042044_P001	Maize	plastid	70.16	51.52
Bra028809.1-P	Field mustard	plastid	28.25	15.78
Bra026145.1-P	Field mustard	cytosol	23.49	15.45
Bra009499.1-P	Field mustard	plastid	27.62	15.37
Bra018760.1-P	Field mustard	cytosol	22.86	14.55
Bra014161.1-P	Field mustard	cytosol	22.86	14.52
Bra024060.1-P	Field mustard	cytosol, endoplasmic reticulum	27.3	14.01
Bra011203.1-P	Field mustard	endoplasmic reticulum	26.35	13.34
Bra014811.1-P	Field mustard	cytosol, endoplasmic reticulum	20.95	12.52
Bra014039.1-P	Field mustard	cytosol	15.24	11.68

Protein Annotations

Gene3D:1.20.120.140	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	EnsemblPlantsGene:Bra039315	EnsemblPlants:Bra039315.1
EnsemblPlants:Bra039315.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006614	GO:GO:0006810	GO:GO:0008150	UniProt:M4FDZ4
InterPro:P-loop_NTPase	PFAM:PF00448	PFAM:PF02881	ScanProsite:PS00300	PANTHER:PTHR43134	PANTHER:PTHR43134:SF2
SMART:SM00382	SMART:SM00962	InterPro:SRP/SRP_N	InterPro:SRP54_GTPase_dom	InterPro:SR_rcpt_FtsY	SUPFAM:SSF47364
SUPFAM:SSF52540	InterPro:Signal_recog_particl_SRP54_hlx	UniParc:UPI000254444E	SEG:seg	:	:

Description

AT2G45770 (E=9e-057) CPFTSY, FRD4 | CPFTSY; 7S RNA binding / GTP binding / nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA04:+:18645044..18647047

Molecular Weight (calculated)

33902.1 Da

IEP (calculated)

8.485

GRAVY (calculated)

0.026

Length

315 amino acids

Sequence
(BLAST)

001: MSSSSSSAHL SFLTGRLSPP FSSERVGPPP QRVEFRIPKS RFRCSAGQSG FFTRLGRLIK EKAKSDVEKV FSGFSKTREN LAVIDELLLF WNLAETDRVL
101: DELEEALLVS DFGPKITVRI VERLRDDIMS GKLKKPAVIM IVGVNGGGKT TSLGKLAHRL KNEGTKVLMA AGDTFRAAAS DQLEIWAERT GCDIVVAEGE
201: KAKAATVLTK AVKRGKEEGY DIVLCDTSGR LHTNFSLMEE LIACKKAVGK VVSGAPNIVG ITGLILTKLD GSARGGCVVS VVEELGIPVK FIGVGEAVED
301: LQPFDAEAFV NAIFS

Best Arabidopsis Sequence Match ( AT2G45770.1 )
(BLAST)

001: MATSSAHLSF LAGRISPFSS ERIGLFPLRG EFRPRMTRFR CSAGPSGFFT RLGRLIKEKA KSDVEKVFSG FSKTRENLAV IDELLLFWNL AETDRVLDEL
101: EEALLVSDFG PKITVRIVER LREDIMSGKL KSGSEIKDAL KESVLEMLAK KNSKTELQLG FRKPAVIMIV GVNGGGKTTS LGKLAHRLKN EGTKVLMAAG
201: DTFRAAASDQ LEIWAERTGC EIVVAEGDKA KAATVLSKAV KRGKEEGYDV VLCDTSGRLH TNYSLMEELI ACKKAVGKIV SGAPNEILLV LDGNTGLNML
301: PQAREFNEVV GITGLILTKL DGSARGGCVV SVVEELGIPV KFIGVGEAVE DLQPFDPEAF VNAIFS

Arabidopsis Description

CPFTSYCell division protein FtsY homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80842]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.