Factsheet for Zm00001d042044_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008625_P001
Zm00001d017475_P002
Zm00001d017793_P001
Zm00001d023431_P002
Zm00001d027518_P001
Zm00001d039852_P001
Zm00001d051589_P001
Zm00001d052556_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45770.1	Zm00001d008625_P001	AT2G28800.1	14517205
AT2G45770.1	Zm00001d039852_P001	AT2G28800.1	14517205
AT2G45770.1	Zm00001d027518_P001	AT2G47450.1	14517205
AT2G45770.1	Zm00001d017793_P001	AT3G27960.1	21798944
AT2G45770.1	Zm00001d051589_P001	AT3G27960.1	21798944
AT2G45770.1	Zm00001d017475_P002	AT3G48150.1	21798944
AT2G45770.1	Zm00001d023431_P002	AT5G03940.1	14517205
AT2G45770.1	Zm00001d052556_P001	AT5G03940.1	14517205

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04254	Sorghum	plastid	83.45	97.81
Os01t0958100-01	Rice	plastid	78.32	92.56
TraesCS3A01G498300.1	Wheat	plastid	75.06	89.69
TraesCSU01G058200.1	Wheat	plastid	75.06	89.44
TraesCS3B01G561300.1	Wheat	plastid	73.89	88.8
HORVU3Hr1G110160.4	Barley	mitochondrion	74.36	79.95
CDY18901	Canola	plastid	61.31	72.85
KRH65131	Soybean	plastid	63.17	72.85
KRH48224	Soybean	plastid	63.17	72.85
CDX74765	Canola	plastid	62.24	72.55
Bra004937.1-P	Field mustard	plastid	62.0	72.28
AT2G45770.1	Thale cress	plastid	61.54	72.13
GSMUA_Achr11P...	Banana	plastid	64.1	71.99
VIT_15s0048g02080.t01	Wine grape	plastid	60.84	71.12
CDY37064	Canola	plastid	60.84	70.92
CDY27360	Canola	plastid	60.14	70.3
Bra039315.1-P	Field mustard	plastid	51.52	70.16
PGSC0003DMT400071384	Potato	plastid	60.14	70.11
Solyc01g091580.2.1	Tomato	plastid	60.14	70.11
Zm00001d043303_P001	Maize	cytosol	20.51	17.81
Zm00001d012652_P003	Maize	extracellular	20.28	17.4
Zm00001d038661_P001	Maize	cytosol	18.41	16.39
Zm00001d052556_P001	Maize	plastid	20.75	16.33
Zm00001d023431_P002	Maize	plastid	21.45	16.31
Zm00001d027293_P004	Maize	cytosol, endoplasmic reticulum, mitochondrion, plastid	22.38	15.21

Protein Annotations

Gene3D:1.20.120.140	MapMan:23.1.7.4	Gene3D:3.40.50.300	UniProt:A0A1D6N0Q6	InterPro:AAA+_ATPase	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006614	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0051301	ProteinID:ONM34369.1
InterPro:P-loop_NTPase	PFAM:PF00448	ScanProsite:PS00300	PANTHER:PTHR43134	PANTHER:PTHR43134:SF2	SMART:SM00382
SMART:SM00962	InterPro:SRP/SRP_N	InterPro:SRP54_GTPase_dom	InterPro:SR_rcpt_FtsY	SUPFAM:SSF47364	SUPFAM:SSF52540
UniParc:UPI0008442C5B	EnsemblPlantsGene:Zm00001d042044	EnsemblPlants:Zm00001d042044_P001	EnsemblPlants:Zm00001d042044_T001	SEG:seg	:

Description

Cell division protein FtsY homolog chloroplastic

Coordinates

chr3:+:148445216..148448764

Molecular Weight (calculated)

45809.7 Da

IEP (calculated)

5.535

GRAVY (calculated)

0.203

Length

429 amino acids

Sequence
(BLAST)

001: MAAPSHVLPF LSPAGGCAAS SARAHSGYRA GLLRCSAAAG QAGFFTRLGR LIKEKAKSDV EKLFSGFSKT RENLSVVDEL LTYWNLADTD RVLDDLEEVL
101: LPTTASVLPL TLSAACPICS VLMMLLADAH PVTQALLVSD FGPKISFRIV DTLREEIRDG KLKSGAEIKA ALKRCILELL TSKGGNSELN LGFRKPAVIM
201: IVGVNGGGKT TSLGKLAYRF KNEGVKVLMA AGDTFRAAAR DQLEVWAERT GSEIVIDNDK KAQPPAVLSQ AVKRGKREGF DVVLCDTSGS MVVTTDFDYH
301: LFIGIYLLLA EINDIGAPFA GLHTNYGLME ELVSCKKVLA KALPGAPNEI LLVLDGTTGL NMLQQAREFN DVVGVTGFIL TKLDGTARGG CVVSVVDELG
401: IPVKFIGVGE GMEDLQPFDA EAFVEAIFP

Best Arabidopsis Sequence Match ( AT2G45770.1 )
(BLAST)

001: MATSSAHLSF LAGRISPFSS ERIGLFPLRG EFRPRMTRFR CSAGPSGFFT RLGRLIKEKA KSDVEKVFSG FSKTRENLAV IDELLLFWNL AETDRVLDEL
101: EEALLVSDFG PKITVRIVER LREDIMSGKL KSGSEIKDAL KESVLEMLAK KNSKTELQLG FRKPAVIMIV GVNGGGKTTS LGKLAHRLKN EGTKVLMAAG
201: DTFRAAASDQ LEIWAERTGC EIVVAEGDKA KAATVLSKAV KRGKEEGYDV VLCDTSGRLH TNYSLMEELI ACKKAVGKIV SGAPNEILLV LDGNTGLNML
301: PQAREFNEVV GITGLILTKL DGSARGGCVV SVVEELGIPV KFIGVGEAVE DLQPFDPEAF VNAIFS

Arabidopsis Description

CPFTSYCell division protein FtsY homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80842]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.