Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31875 | Sorghum | plastid | 87.25 | 87.25 |
| Zm00001d008625_P001 | Maize | mitochondrion | 88.79 | 86.88 |
| HORVU3Hr1G013690.6 | Barley | mitochondrion | 76.26 | 83.21 |
| TraesCS3D01G075800.1 | Wheat | plastid | 79.56 | 80.44 |
| TraesCS3B01G089800.1 | Wheat | plastid | 79.34 | 80.4 |
| TraesCS3A01G075700.1 | Wheat | plastid | 79.34 | 80.4 |
| Os01t0151200-01 | Rice | plasma membrane | 80.66 | 79.96 |
| VIT_06s0004g04460.t01 | Wine grape | plastid | 69.45 | 69.45 |
| PGSC0003DMT400001063 | Potato | plastid | 67.25 | 68.3 |
| Solyc11g066110.1.1 | Tomato | plastid | 67.03 | 68.23 |
| KRH24811 | Soybean | plastid | 66.81 | 67.56 |
| KRH29812 | Soybean | plastid | 66.81 | 67.56 |
| CDY31733 | Canola | plastid | 65.49 | 67.12 |
| Bra035669.1-P | Field mustard | plastid | 65.71 | 66.89 |
| CDX77209 | Canola | plastid | 64.62 | 66.22 |
| AT2G28800.1 | Thale cress | plastid | 65.05 | 64.07 |
| GSMUA_Achr9P03990_001 | Banana | mitochondrion, plastid | 61.76 | 63.29 |
| Zm00001d012861_P001 | Maize | plastid | 51.65 | 47.28 |
| GSMUA_Achr5P28630_001 | Banana | cytosol, nucleus, plasma membrane | 64.84 | 42.14 |
Protein Annotations
| MapMan:23.1.7.5 | UniProt:B4FSN2 | EMBL:BT040120 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0032977 | GO:GO:0051205 | InterPro:Membr_insert_YidC/Oxa1_C | ProteinID:ONM30012.1 | PFAM:PF02096 |
| PANTHER:PTHR12428 | PANTHER:PTHR12428:SF19 | TIGRFAMs:TIGR03592 | TMHMM:TMhelix | UniParc:UPI00017B77CD | InterPro:YidC/ALB3/OXA1/COX18 |
| EnsemblPlantsGene:Zm00001d039852 | EnsemblPlants:Zm00001d039852_P001 | EnsemblPlants:Zm00001d039852_T001 | SEG:seg | : | : |
Description
Inner membrane protein ALBINO3 chloroplastic
Coordinates
chr3:-:16634991..16640993
Molecular Weight (calculated)
48683.7 Da
IEP (calculated)
9.725
GRAVY (calculated)
-0.083
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKALLSSSL LPALPGAAGG SRSAARPMLL PPLRLRRGRR GASACEVRAG LHGLDSVGGP HLQAALERAE AALYTLADAA VAAADTAAGA GADAGQAAAV
101: QKNSGWFGFI SEALEVVLKV LKDGLSAVHV PYSYGFAIIL LTIIVKAATL PLTKKQVEST LAMQNLQPQI KAIQQRYAGN QERIQLETAR LYKQAGVNPL
201: AGCFPTLATI PVWIGLYQAL SNVANEGLLT EGFFWIPSLG GPTTIAARQS GSGITWLFPF VDGHPPLGWH DTICYLVLPV LLVASQYVSM EIMKPPQSDD
301: PSQKNTMLIL KFLPFMIGWF SLSVPSGLSI YWFTNNVLST AQQVWLRKMG GAKPVVTEGG SGIITAGRAK RSNAQPAGER FRQLKEEENR RKFSKALAAG
401: DSDASSSTYD MDDEESDETI EEGGPVEEAS TSSDKKLPNY SGKKGKRSKR KRMVQ
101: QKNSGWFGFI SEALEVVLKV LKDGLSAVHV PYSYGFAIIL LTIIVKAATL PLTKKQVEST LAMQNLQPQI KAIQQRYAGN QERIQLETAR LYKQAGVNPL
201: AGCFPTLATI PVWIGLYQAL SNVANEGLLT EGFFWIPSLG GPTTIAARQS GSGITWLFPF VDGHPPLGWH DTICYLVLPV LLVASQYVSM EIMKPPQSDD
301: PSQKNTMLIL KFLPFMIGWF SLSVPSGLSI YWFTNNVLST AQQVWLRKMG GAKPVVTEGG SGIITAGRAK RSNAQPAGER FRQLKEEENR RKFSKALAAG
401: DSDASSSTYD MDDEESDETI EEGGPVEEAS TSSDKKLPNY SGKKGKRSKR KRMVQ
001: MARVLVSSPS SFFGSPLIKP SSSLRHSGVG GGGTAQFLPY RSNNNKLFTT STTVRFSLNE IPPFHGLDSS VDIGAIFTRA ESLLYTIADA AVVGADSVVT
101: TDSSAVQKSG GWFGFISDAM ELVLKILKDG LSAVHVPYAY GFAIILLTII VKAATYPLTK QQVESTLAMQ NLQPKIKAIQ QRYAGNQERI QLETSRLYKQ
201: AGVNPLAGCL PTLATIPVWI GLYQALSNVA NEGLFTEGFF WIPSLGGPTS IAARQSGSGI SWLFPFVDGH PPLGWYDTVA YLVLPVLLIA SQYVSMEIMK
301: PPQTDDPAQK NTLLVFKFLP LMIGYFALSV PSGLSIYWLT NNVLSTAQQV YLRKLGGAKP NMDENASKII SAGRAKRSIA QPDDAGERFR QLKEQEKRSK
401: KNKAVAKDTV ELVEESQSES EEGSDDEEEE AREGALASST TSKPLPEVGQ RRSKRSKRKR TV
101: TDSSAVQKSG GWFGFISDAM ELVLKILKDG LSAVHVPYAY GFAIILLTII VKAATYPLTK QQVESTLAMQ NLQPKIKAIQ QRYAGNQERI QLETSRLYKQ
201: AGVNPLAGCL PTLATIPVWI GLYQALSNVA NEGLFTEGFF WIPSLGGPTS IAARQSGSGI SWLFPFVDGH PPLGWYDTVA YLVLPVLLIA SQYVSMEIMK
301: PPQTDDPAQK NTLLVFKFLP LMIGYFALSV PSGLSIYWLT NNVLSTAQQV YLRKLGGAKP NMDENASKII SAGRAKRSIA QPDDAGERFR QLKEQEKRSK
401: KNKAVAKDTV ELVEESQSES EEGSDDEEEE AREGALASST TSKPLPEVGQ RRSKRSKRKR TV
Arabidopsis Description
ALB3ALB3 [Source:UniProtKB/TrEMBL;Acc:A0A178VUV3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.