Factsheet for Zm00001d029745_P004

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG39014	Sorghum	plastid	70.53	77.01
Os10t0536500-01	Rice	plasma membrane	68.95	76.16
TraesCS1B01G214700.1	Wheat	plastid	65.79	74.4
TraesCS1D01G203500.2	Wheat	plastid	66.32	74.12
TraesCS1A01G200000.2	Wheat	plastid	66.32	74.12
HORVU1Hr1G051700.6	Barley	plastid	64.21	69.32
CDY27519	Canola	mitochondrion	28.42	42.19
VIT_15s0048g02500.t01	Wine grape	plastid	37.89	42.11
GSMUA_Achr8P12340_001	Banana	plastid	37.89	41.14
Solyc10g005050.2.1	Tomato	plastid	38.95	41.11
PGSC0003DMT400029398	Potato	plastid	38.42	40.56
KRH47772	Soybean	plastid	34.74	39.29
Zm00001d021370_P001	Maize	plastid	31.58	38.96
CDY41562	Canola	plastid	37.37	38.8
GSMUA_AchrUn_...	Banana	plastid	34.21	38.69
KRH06344	Soybean	plastid	34.21	38.69
Bra004504.1-P	Field mustard	plastid	36.84	38.25
CDX80050	Canola	plastid	36.32	37.7
AT2G46820.1	Thale cress	plastid	34.21	37.36
CDY48012	Canola	plastid	32.63	37.13
Bra040482.1-P	Field mustard	plastid	32.63	37.13
CDY27520	Canola	plastid	28.95	35.03
KRH68969	Soybean	cytosol	36.84	31.11
Zm00001d012689_P001	Maize	plastid	24.74	28.31
Zm00001d037323_P001	Maize	plastid	21.05	27.03
KRG97255	Soybean	plastid	27.89	26.37
Zm00001d051785_P001	Maize	plastid	21.58	26.11
Zm00001d027456_P001	Maize	plastid	20.0	25.33
Zm00001d032232_P007	Maize	mitochondrion	21.05	25.32
Zm00001d005926_P001	Maize	plastid	21.05	22.1
Zm00001d052184_P001	Maize	plastid	21.05	20.2
Zm00001d018130_P001	Maize	plastid	19.47	18.78

Protein Annotations

EnsemblPlants:Zm00001d029745_P004	EnsemblPlants:Zm00001d029745_T004	EnsemblPlantsGene:Zm00001d029745	EntrezGene:100191656	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1
PANTHER:PTHR33222	PANTHER:PTHR33222:SF6	PFAM:PF14159	ProteinID:ONL99524.1	ProteinID:ONL99525.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000842BC58	UniProt:A0A1D6K7J4	MapMan:35.1	:	:

Description

Protein CURVATURE THYLAKOID 1B chloroplastic

Coordinates

chr1:+:85097979..85099597

Molecular Weight (calculated)

19756.1 Da

IEP (calculated)

9.923

GRAVY (calculated)

0.272

Length

190 amino acids

Sequence
(BLAST)

001: MAPAAPAATG AASPAVTKGG GKVAARSVRL GLPALPPLPG LSLAAQGQTR AASSLYKRLA RDVVAMAAGE PAAPQAANEE LTEFVDALKK EAGRSTMTRL
101: LLVAAACVVK WDRIEDKYAV TTLAVAATLG MWSAGGVVSA IDRLPVVPGL MQAVGIGYSG WFAYRNLLFK PDRDAFFAKV REIYEDIISA

Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)

001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Arabidopsis Description

CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.