Factsheet for Zm00001d005926_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99031	Sorghum	mitochondrion, plastid	91.71	86.91
Os09t0465800-01	Rice	plastid	70.72	70.72
TraesCS5A01G247100.1	Wheat	plastid	69.06	68.31
TraesCS5D01G253600.1	Wheat	plastid	68.51	67.76
TraesCS5B01G244200.1	Wheat	mitochondrion, plastid	68.51	67.76
GSMUA_Achr5P17930_001	Banana	cytosol	29.28	46.9
HORVU0Hr1G013240.2	Barley	cytosol	49.72	42.65
GSMUA_Achr6P04200_001	Banana	cytosol	28.73	37.96
AT4G38100.1	Thale cress	plastid	34.81	32.64
Bra010636.1-P	Field mustard	plastid	33.7	31.94
CDX90383	Canola	plastid	33.7	31.12
Zm00001d051785_P001	Maize	plastid	26.52	30.57
KRH69655	Soybean	endoplasmic reticulum	32.6	29.5
KRH74509	Soybean	plastid	32.04	29.44
CDY52513	Canola	plastid	32.6	29.06
Zm00001d037323_P001	Maize	plastid	23.76	29.05
Zm00001d027456_P001	Maize	plastid	23.76	28.67
Zm00001d032232_P007	Maize	mitochondrion	24.86	28.48
VIT_00s0199g00110.t01	Wine grape	plastid	31.49	27.94
VIT_00s0199g00150.t01	Wine grape	plastid	31.49	27.94
Zm00001d052184_P001	Maize	plastid	27.07	24.75
Zm00001d018130_P001	Maize	plastid	25.97	23.86
GSMUA_Achr7P12860_001	Banana	plastid	30.94	23.53
Zm00001d021370_P001	Maize	plastid	19.34	22.73
Zm00001d029745_P004	Maize	plastid	22.1	21.05
Zm00001d012689_P001	Maize	plastid	16.02	17.47
Solyc11g010480.1.1	Tomato	plastid	30.39	10.58
PGSC0003DMT400041783	Potato	plastid	29.83	7.05

Protein Annotations

EntrezGene:100286365	MapMan:35.1	UniProt:B6U7I7	InterPro:CAAD_dom	InterPro:CURT1	EMBL:EU973202
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	ProteinID:ONM22377.1	PFAM:PF14159	PANTHER:PTHR33222
PANTHER:PTHR33222:SF2	TMHMM:TMhelix	UniParc:UPI000182F119	EnsemblPlantsGene:Zm00001d005926	EnsemblPlants:Zm00001d005926_P001	EnsemblPlants:Zm00001d005926_T001
SEG:seg	:	:	:	:	:

Description

Threonine endopeptidase

Coordinates

chr2:-:193000868..193008427

Molecular Weight (calculated)

19593.3 Da

IEP (calculated)

5.344

GRAVY (calculated)

-0.166

Length

181 amino acids

Sequence
(BLAST)

001: MAFAARAALV RVLPPRPSPT SQPKQLKQGL GGRGGSSLAV RAKDSDDFGA LLSEKLDAQA PEKRDGRDGF GREASSVEEE KEVQGEPASW GVLNQIGVEL
101: DSDKSYSALI YGTSALVAIW ISSIVVSALD SVPLVPQVME VVGLGFTIWF TSRYLIFKEN RDELFTRVSS IKKQILGSHE N

Best Arabidopsis Sequence Match ( AT4G38100.1 )
(BLAST)

001: MELCTRSTTI ITHLPASFNG HGYLAGKSVD RISLPLQRNV ASLVLQSRTL RCSRKFPGET VTEETSTGVN EFGVEDRDGV VVAAEEKNSN SEAPQAEDEE
101: TQALEFLNDI KLDSDKTYSI LLYGSGAIVA LYLTSAIVSS LEAIPLFPKL MEVVGLGYTL WFTTRYLLFK RNREELKTKV SEIKKQVLGS DSE

Arabidopsis Description

CURT1DProtein CURVATURE THYLAKOID 1D, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDD3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.