Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P04200_001 | Banana | cytosol | 64.6 | 53.28 |
| GSMUA_Achr7P12860_001 | Banana | plastid | 64.6 | 30.67 |
| Zm00001d005926_P001 | Maize | plastid | 46.9 | 29.28 |
| TraesCS5D01G253600.1 | Wheat | plastid | 44.25 | 27.32 |
| Os09t0465800-01 | Rice | plastid | 43.36 | 27.07 |
| TraesCS5B01G244200.1 | Wheat | mitochondrion, plastid | 43.36 | 26.78 |
| TraesCS5A01G247100.1 | Wheat | plastid | 43.36 | 26.78 |
| EER99031 | Sorghum | mitochondrion, plastid | 45.13 | 26.7 |
| VIT_00s0199g00150.t01 | Wine grape | plastid | 47.79 | 26.47 |
| VIT_00s0199g00110.t01 | Wine grape | plastid | 47.79 | 26.47 |
| AT4G38100.1 | Thale cress | plastid | 43.36 | 25.39 |
| GSMUA_Achr3P20270_001 | Banana | plastid | 35.4 | 23.67 |
| GSMUA_Achr10P... | Banana | plastid | 36.28 | 23.56 |
| Bra010636.1-P | Field mustard | plastid | 39.82 | 23.56 |
| HORVU0Hr1G013240.2 | Barley | cytosol | 43.36 | 23.22 |
| CDX90383 | Canola | plastid | 39.82 | 22.96 |
| KRH69655 | Soybean | endoplasmic reticulum | 39.82 | 22.5 |
| KRH74509 | Soybean | plastid | 38.94 | 22.34 |
| CDY52513 | Canola | plastid | 39.82 | 22.17 |
| GSMUA_Achr8P12340_001 | Banana | plastid | 29.2 | 18.86 |
| GSMUA_Achr6P26770_001 | Banana | plastid | 23.89 | 18.62 |
| GSMUA_AchrUn_... | Banana | plastid | 25.66 | 17.26 |
| GSMUA_Achr7P18720_001 | Banana | plastid | 35.4 | 17.17 |
| Solyc11g010480.1.1 | Tomato | plastid | 38.94 | 8.46 |
| PGSC0003DMT400041783 | Potato | plastid | 38.05 | 5.61 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P17930_001 | EnsemblPlants:GSMUA_Achr5T17930_001 | EnsemblPlantsGene:GSMUA_Achr5G17930_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0009579 | GO:GO:0016020 | GO:GO:0016021 | InterPro:CAAD_dom | InterPro:CURT1 | ncoils:Coil |
| PANTHER:PTHR33222 | PANTHER:PTHR33222:SF2 | PFAM:PF14159 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002953B2F |
| UniProt:M0SZH2 | MapMan:35.1 | : | : | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_199.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr5G17930_001]
Coordinates
chr5:+:19162551..19168133
Molecular Weight (calculated)
12495.9 Da
IEP (calculated)
4.390
GRAVY (calculated)
0.031
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSSYGEGDN PDGGEQIAEA ANNLLSKLNL KIDSEEAYGI LFYVAGALAA LWISAAFVSS IDSLPVFPKV MEVVGLGFTI WFSTRYLIFK ENRDELFTKL
101: DELKEKILGP SNK
101: DELKEKILGP SNK
001: MELCTRSTTI ITHLPASFNG HGYLAGKSVD RISLPLQRNV ASLVLQSRTL RCSRKFPGET VTEETSTGVN EFGVEDRDGV VVAAEEKNSN SEAPQAEDEE
101: TQALEFLNDI KLDSDKTYSI LLYGSGAIVA LYLTSAIVSS LEAIPLFPKL MEVVGLGYTL WFTTRYLLFK RNREELKTKV SEIKKQVLGS DSE
101: TQALEFLNDI KLDSDKTYSI LLYGSGAIVA LYLTSAIVSS LEAIPLFPKL MEVVGLGYTL WFTTRYLLFK RNREELKTKV SEIKKQVLGS DSE
Arabidopsis Description
CURT1DProtein CURVATURE THYLAKOID 1D, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDD3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.