Factsheet for GSMUA_Achr3P20270_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P15760_001
GSMUA_Achr3P31920_001
GSMUA_Achr4P08400_001
GSMUA_Achr5P06850_001
GSMUA_Achr6P31860_001
GSMUA_Achr8P27830_001
GSMUA_Achr9P05440_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01150.1	GSMUA_Achr10P...	AT5G41600.1	21798944
AT4G01150.1	GSMUA_Achr3P15760_001	AT5G41600.1	21798944
AT4G01150.1	GSMUA_Achr3P31920_001	AT5G41600.1	21798944
AT4G01150.1	GSMUA_Achr4P08400_001	AT5G41600.1	21798944
AT4G01150.1	GSMUA_Achr5P06850_001	AT5G41600.1	21798944
AT4G01150.1	GSMUA_Achr6P31860_001	AT5G41600.1	21798944
AT4G01150.1	GSMUA_Achr8P27830_001	AT5G41600.1	21798944
AT4G01150.1	GSMUA_Achr9P05440_001	AT5G41600.1	21798944
AT4G01150.1	GSMUA_AchrUn_...	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plastid	78.7	76.44
Os02t0731600-01	Rice	cytosol	44.38	69.44
EER89571	Sorghum	plastid	55.03	62.84
Zm00001d037323_P001	Maize	plastid	54.44	62.16
Zm00001d051785_P001	Maize	plastid	57.4	61.78
PGSC0003DMT400000589	Potato	plastid	60.95	61.68
VIT_16s0050g02240.t01	Wine grape	plastid	57.99	60.87
VIT_15s0046g01470.t01	Wine grape	plastid	58.58	59.64
Zm00001d027456_P001	Maize	plastid	52.07	58.67
Solyc01g095430.2.1	Tomato	plastid	58.58	58.24
TraesCS6A01G292800.2	Wheat	plastid	53.85	57.96
Os06t0264800-01	Rice	plastid	53.25	57.69
KRH06541	Soybean	plastid	55.62	57.67
GSMUA_Achr7P18720_001	Banana	plastid	79.29	57.51
TraesCS6B01G323200.2	Wheat	plastid	53.25	57.32
TraesCS7B01G114100.1	Wheat	plastid	53.25	56.96
TraesCS7A01G206700.1	Wheat	plastid	53.25	56.96
KRH47985	Soybean	plastid	54.44	56.44
TraesCS7D01G209600.1	Wheat	plastid	52.66	56.33
TraesCS6D01G273900.1	Wheat	plastid	53.25	56.25
CDY48508	Canola	plastid	52.07	54.32
Bra037380.1-P	Field mustard	plastid	52.07	54.32
AT4G01150.1	Thale cress	plastid	52.66	54.27
KXG30819	Sorghum	plastid	55.62	54.02
CDY53863	Canola	plastid	53.85	53.85
Bra008533.1-P	Field mustard	plastid	53.85	53.85
CDX91881	Canola	plastid	52.07	53.66
CDX74360	Canola	plasma membrane, plastid	52.07	53.66
CDY07178	Canola	plastid	53.25	53.57
CDY01956	Canola	plastid	53.25	53.25
Solyc10g011770.2.1	Tomato	plastid	52.66	52.66
Bra000947.1-P	Field mustard	plastid	50.89	52.44
GSMUA_Achr5P17930_001	Banana	cytosol	23.67	35.4
HORVU6Hr1G073100.4	Barley	plastid	54.44	32.74
GSMUA_Achr6P04200_001	Banana	cytosol	23.08	28.47
GSMUA_Achr6P26770_001	Banana	plastid	22.49	26.21
GSMUA_AchrUn_...	Banana	plastid	24.26	24.4
GSMUA_Achr8P12340_001	Banana	plastid	24.85	24.0
GSMUA_Achr7P12860_001	Banana	plastid	25.44	18.07

Protein Annotations

EnsemblPlants:GSMUA_Achr3P20270_001	EnsemblPlants:GSMUA_Achr3T20270_001	EnsemblPlantsGene:GSMUA_Achr3G20270_001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222
PANTHER:PTHR33222:SF4	PFAM:PF14159	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002952843	UniProt:M0SG93
MapMan:35.1	:	:	:	:	:

Description

Uncharacterized protein At4g01150, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G20270_001]

Coordinates

chr3:-:21458931..21460393

Molecular Weight (calculated)

17964.6 Da

IEP (calculated)

9.411

GRAVY (calculated)

0.099

Length

169 amino acids

Sequence
(BLAST)

001: MAAFAASSPA ATAVLGGARL SSSSSAALRT PVLHLPPPPR RHFSTHPLPL SCDAARFSSL RVKASSSSEE SSGSVQTDEL LADLKEKWDS IENKSTVFLY
101: GGGALLAVWL SAVVIGAVNS VPLLPKIMEL VGLGYTGWFV YRYLLYKDSR KELATDIEAL KKKIAGTGE

Best Arabidopsis Sequence Match ( AT4G01150.1 )
(BLAST)

001: MAISVAASSS MAVMVPRVPA VSTRCSAVPY LPPRSFGRSS FTVPLKLVSG NGLQKVELLK TRASSEETSS IDTNELITDL KEKWDGLENK STVLIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE

Arabidopsis Description

CURT1AProtein CURVATURE THYLAKOID 1A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04616]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.