CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008533.1-P	Field mustard	plastid	100.0	100.0
CDY01956	Canola	plastid	98.22	98.22
CDX91881	Canola	plastid	89.35	92.07
CDY48508	Canola	plastid	88.17	91.98
CDY07178	Canola	plastid	91.12	91.67
CDX74360	Canola	plasma membrane, plastid	88.76	91.46
AT4G01150.1	Thale cress	plastid	84.62	87.2
Os02t0731600-01	Rice	cytosol	46.15	72.22
PGSC0003DMT400000589	Potato	plastid	64.5	65.27
KRH47985	Soybean	plastid	62.13	64.42
KRH06541	Soybean	plastid	61.54	63.8
VIT_16s0050g02240.t01	Wine grape	plastid	59.76	62.73
Solyc01g095430.2.1	Tomato	plastid	62.72	62.35
VIT_15s0046g01470.t01	Wine grape	plastid	60.95	62.05
Solyc10g011770.2.1	Tomato	plastid	59.76	59.76
EER89571	Sorghum	plastid	51.48	58.78
Zm00001d037323_P001	Maize	plastid	50.89	58.11
Zm00001d051785_P001	Maize	plastid	53.25	57.32
TraesCS6A01G292800.2	Wheat	plastid	51.48	55.41
Zm00001d027456_P001	Maize	plastid	49.11	55.33
TraesCS6B01G323200.2	Wheat	plastid	50.89	54.78
GSMUA_Achr10P...	Banana	plastid	55.62	54.02
GSMUA_Achr3P20270_001	Banana	plastid	53.85	53.85
TraesCS6D01G273900.1	Wheat	plastid	50.89	53.75
Os06t0264800-01	Rice	plastid	48.52	52.56
TraesCS7A01G206700.1	Wheat	plastid	48.52	51.9
TraesCS7D01G209600.1	Wheat	plastid	47.93	51.27
TraesCS7B01G114100.1	Wheat	plastid	47.93	51.27
KXG30819	Sorghum	plastid	52.07	50.57
GSMUA_Achr7P18720_001	Banana	plastid	55.62	40.34
HORVU6Hr1G073100.4	Barley	plastid	54.44	32.74
CDY52984	Canola	plastid	26.04	30.34
CDY67261	Canola	plastid	25.44	29.66
CDY27520	Canola	plastid	26.04	28.03
CDX90383	Canola	plastid	31.95	27.55
CDY27519	Canola	mitochondrion	20.71	27.34
CDY48012	Canola	plastid	26.63	26.95
CDY41562	Canola	plastid	28.4	26.23
CDX80050	Canola	plastid	28.4	26.23
CDY52513	Canola	plastid	30.77	25.62

Protein Annotations

EnsemblPlants:CDY53863	EnsemblPlantsGene:GSBRNA2T00011565001	GO:A0A078IXX3	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	ncoils:Coil
PANTHER:PTHR33222	PANTHER:PTHR33222:SF4	PFAM:PF14159	ProteinID:CDY53863	ProteinID:CDY53863.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000254700A	UniProt:A0A078IXX3	MapMan:35.1	:	:

Description

BnaA02g36380DBnaA02g36380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXX3]

Coordinates

chrLK033244:-:55528..56610

Molecular Weight (calculated)

18270.2 Da

IEP (calculated)

9.643

GRAVY (calculated)

0.078

Length

169 amino acids

Sequence
(BLAST)

001: MAMTVAASSS VAVMIPRVTS VSDRFSAVPY LPPLPPRSFG RSSFTVPPKL VSGNGSQKGE LMKMRASSSD ETSTSIDTNE LFTDLKEKWD GLENKSTVII
101: YGGGAIVAVW LSSIVVGAIN SVPLLPKVME LVGLGYTGWF VYRYLLFKSS RKELAEDIDS LKKKIAGTE

Best Arabidopsis Sequence Match ( AT4G01150.1 )
(BLAST)

001: MAISVAASSS MAVMVPRVPA VSTRCSAVPY LPPRSFGRSS FTVPLKLVSG NGLQKVELLK TRASSEETSS IDTNELITDL KEKWDGLENK STVLIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE

Arabidopsis Description

CURT1AProtein CURVATURE THYLAKOID 1A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04616]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.