Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G52220.1 | CDY21916 | AT1G03130.1 | 18813226 |
| AT1G52220.1 | CDY22079 | AT1G03130.1 | 18813226 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018954.1-P | Field mustard | plastid | 99.31 | 99.31 |
| CDY67261 | Canola | plastid | 97.93 | 97.93 |
| AT1G52220.1 | Thale cress | plastid | 86.21 | 80.13 |
| KRH47274 | Soybean | plastid | 61.38 | 61.38 |
| VIT_09s0002g04360.t01 | Wine grape | plastid | 57.24 | 56.85 |
| GSMUA_Achr6P26770_001 | Banana | plastid | 48.97 | 48.97 |
| Solyc06g066620.2.1 | Tomato | plastid | 48.97 | 48.3 |
| KRH44347 | Soybean | plastid | 50.34 | 43.2 |
| OQU87593 | Sorghum | plastid | 41.38 | 40.0 |
| TraesCS3D01G296900.1 | Wheat | plastid | 39.31 | 37.75 |
| Os01t0761000-01 | Rice | plastid | 38.62 | 37.09 |
| TraesCS3B01G331600.1 | Wheat | plastid | 38.62 | 36.84 |
| TraesCS3A01G304900.1 | Wheat | plastid | 37.93 | 36.18 |
| CDY27519 | Canola | mitochondrion | 31.03 | 35.16 |
| Zm00001d012689_P001 | Maize | plastid | 37.24 | 32.53 |
| CDY48012 | Canola | plastid | 35.86 | 31.14 |
| CDY41562 | Canola | plastid | 35.86 | 28.42 |
| CDX80050 | Canola | plastid | 35.86 | 28.42 |
| CDY27520 | Canola | plastid | 30.34 | 28.03 |
| CDY48508 | Canola | plastid | 29.66 | 26.54 |
| CDX74360 | Canola | plasma membrane, plastid | 29.66 | 26.22 |
| CDY53863 | Canola | plastid | 30.34 | 26.04 |
| CDY01956 | Canola | plastid | 30.34 | 26.04 |
| CDX91881 | Canola | plastid | 28.97 | 25.61 |
| CDY07178 | Canola | plastid | 29.66 | 25.6 |
| CDX90383 | Canola | plastid | 20.0 | 14.8 |
| CDY52513 | Canola | plastid | 19.31 | 13.79 |
Protein Annotations
| EnsemblPlants:CDY52984 | EnsemblPlantsGene:GSBRNA2T00008262001 | GO:A0A078IU48 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0009579 | GO:GO:0016020 | GO:GO:0016021 | InterPro:CAAD_dom | InterPro:CURT1 | PANTHER:PTHR33222 |
| PANTHER:PTHR33222:SF3 | PFAM:PF14159 | ProteinID:CDY52984 | ProteinID:CDY52984.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EE0A2F | UniProt:A0A078IU48 | MapMan:35.1 | : | : | : |
Description
BnaA06g01690DBnaA06g01690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IU48]
Coordinates
chrLK033147:+:75980..77188
Molecular Weight (calculated)
16007.5 Da
IEP (calculated)
9.973
GRAVY (calculated)
0.173
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVSATLPP PLLLTQRKPN LTSVQKLPFS PIRDRRSHSM SLMVKASGKS SESSDLDVIS SIQNVWDKSE DRLGLIGLSF AAIVALWASL NIITAIDKLP
101: VISSGFELVG ILFSTWFTYR YLLFKPDREE LSQIVKKSVA DILGQ
101: VISSGFELVG ILFSTWFTYR YLLFKPDREE LSQIVKKSVA DILGQ
001: MASISATLPS PLLLTQRKSN LTSIQKLPFS LTRGTNDLSP LSLTRNPSSI SLMVKASGES SDSSTDLDVV STIQNVWDKS EDRLGLIGLG FAGIVALWAS
101: LNLITAIDKL PVISSGFELV GILFSTWFTY RYLLFKPDRQ ELSKIVKKSV ADILGQ
101: LNLITAIDKL PVISSGFELV GILFSTWFTY RYLLFKPDRQ ELSKIVKKSV ADILGQ
Arabidopsis Description
CURT1CCURT1C [Source:UniProtKB/TrEMBL;Acc:A0A178WBD4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.