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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX80050 Canola plastid 96.17 96.17
AT2G46820.1 Thale cress plastid 75.96 79.89
CDY48012 Canola plastid 67.76 74.25
CDY27519 Canola mitochondrion 49.73 71.09
CDY27520 Canola plastid 60.11 70.06
VIT_15s0048g02500.t01 Wine grape plastid 64.48 69.01
KRH06344 Soybean plastid 61.2 66.67
KRH47772 Soybean plastid 60.66 66.07
Solyc10g005050.2.1 Tomato plastid 60.11 61.11
PGSC0003DMT400029398 Potato plastid 60.11 61.11
GSMUA_Achr8P12340_001 Banana plastid 50.27 52.57
GSMUA_AchrUn_... Banana plastid 47.54 51.79
EER97176 Sorghum mitochondrion, plastid 40.98 51.02
Zm00001d021370_P001 Maize plastid 42.08 50.0
KRH68969 Soybean cytosol 61.2 49.78
TraesCS2D01G238700.1 Wheat plastid 38.8 48.97
Os07t0469100-01 Rice plastid 39.34 48.0
KRG97255 Soybean plastid 51.37 46.77
TraesCS1B01G214700.1 Wheat plastid 42.08 45.83
TraesCS1D01G203500.2 Wheat plastid 42.08 45.29
TraesCS1A01G200000.2 Wheat plastid 41.53 44.71
KXG39014 Sorghum plastid 39.89 41.95
HORVU1Hr1G051700.6 Barley plastid 39.89 41.48
Os10t0536500-01 Rice plasma membrane 38.8 41.28
TraesCS2B01G256300.2 Wheat mitochondrion, plastid 35.52 37.79
Zm00001d029745_P004 Maize plastid 38.8 37.37
CDY67261 Canola plastid 28.96 36.55
TraesCS2A01G235000.2 Wheat mitochondrion, plastid 32.79 36.14
CDY52984 Canola plastid 28.42 35.86
CDX74360 Canola plasma membrane, plastid 26.23 29.27
CDX91881 Canola plastid 25.68 28.66
CDY07178 Canola plastid 26.23 28.57
CDY53863 Canola plastid 26.23 28.4
CDY01956 Canola plastid 26.23 28.4
CDY48508 Canola plastid 25.14 28.4
CDX90383 Canola plastid 19.13 17.86
CDY52513 Canola plastid 19.13 17.24
Protein Annotations
EnsemblPlants:CDY41562EnsemblPlantsGene:GSBRNA2T00073197001GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0009579
InterPro:CAAD_domInterPro:CURT1PANTHER:PTHR33222PANTHER:PTHR33222:SF9PFAM:PF14159ProteinID:CDY41562
ProteinID:CDY41562.1SEG:segUniParc:UPI0004EE9783UniProt:A0A078HUS6MapMan:35.1:
Description
BnaC04g00600DBnaC04g00600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUS6]
Coordinates
chrLK032500:+:229663..231209
Molecular Weight (calculated)
19416.1 Da
IEP (calculated)
8.676
GRAVY (calculated)
0.027
Length
183 amino acids
Sequence
(BLAST)
001: MASLSVSSSS TIIDSRAPLP SSRQASASSP SCISLPTLPP QPAKSQTRAA KATAYCRKIV RNVLTRAADV EVAATTQVEA PAANTEAAST ELPDIVKTVQ
101: EAWDKVEDKY AVSSLAVSGF VALWGTAGVI SAIDRLPLVP GVLEVVGIGY TGWFAYKNLV FKPDRESLFQ KVKDTYRDII GSN
Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)
001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS
Arabidopsis Description
CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.