CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004504.1-P	Field mustard	plastid	99.45	99.45
CDY41562	Canola	plastid	96.17	96.17
AT2G46820.1	Thale cress	plastid	75.96	79.89
CDY48012	Canola	plastid	69.4	76.05
CDY27520	Canola	plastid	61.75	71.97
CDY27519	Canola	mitochondrion	50.27	71.88
VIT_15s0048g02500.t01	Wine grape	plastid	65.03	69.59
KRH06344	Soybean	plastid	60.11	65.48
KRH47772	Soybean	plastid	59.56	64.88
Solyc10g005050.2.1	Tomato	plastid	60.66	61.67
PGSC0003DMT400029398	Potato	plastid	60.66	61.67
GSMUA_Achr8P12340_001	Banana	plastid	50.27	52.57
GSMUA_AchrUn_...	Banana	plastid	47.54	51.79
TraesCS2D01G238700.1	Wheat	plastid	39.89	50.34
EER97176	Sorghum	mitochondrion, plastid	40.44	50.34
Zm00001d021370_P001	Maize	plastid	41.53	49.35
KRH68969	Soybean	cytosol	60.66	49.33
Os07t0469100-01	Rice	plastid	39.34	48.0
KRG97255	Soybean	plastid	51.37	46.77
TraesCS1B01G214700.1	Wheat	plastid	41.53	45.24
TraesCS1D01G203500.2	Wheat	plastid	41.53	44.71
TraesCS1A01G200000.2	Wheat	plastid	40.98	44.12
HORVU1Hr1G051700.6	Barley	plastid	39.89	41.48
KXG39014	Sorghum	plastid	38.8	40.8
Os10t0536500-01	Rice	plasma membrane	37.7	40.12
TraesCS2B01G256300.2	Wheat	mitochondrion, plastid	35.52	37.79
CDY67261	Canola	plastid	28.96	36.55
Zm00001d029745_P004	Maize	plastid	37.7	36.32
TraesCS2A01G235000.2	Wheat	mitochondrion, plastid	32.79	36.14
CDY52984	Canola	plastid	28.42	35.86
CDX74360	Canola	plasma membrane, plastid	26.23	29.27
CDX91881	Canola	plastid	25.68	28.66
CDY07178	Canola	plastid	26.23	28.57
CDY53863	Canola	plastid	26.23	28.4
CDY01956	Canola	plastid	26.23	28.4
CDY48508	Canola	plastid	25.14	28.4
CDX90383	Canola	plastid	19.13	17.86
CDY52513	Canola	plastid	19.13	17.24

Protein Annotations

EnsemblPlants:CDX80050	EnsemblPlantsGene:GSBRNA2T00132936001	GO:A0A078CTB9	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222	PANTHER:PTHR33222:SF9	PFAM:PF14159
ProteinID:CDX80050	ProteinID:CDX80050.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0001BA8DAF	MapMan:35.1

Description

BnaA05g01060D

Coordinates

chrLK031819:+:1567135..1568712

Molecular Weight (calculated)

19440.1 Da

IEP (calculated)

8.178

GRAVY (calculated)

-0.016

Length

183 amino acids

Sequence
(BLAST)

001: MASLSVSSSS TIIDSRAPPP SSRQASSSSP SCISLPTLPP QPAQSQTRAA KATAYCRKIV RNVLTRAADV EVAATTQVEA PATNTEAAST ELPDIVKTVQ
101: EAWDKVEDKY AVSSLAVSGF VALWGTAGVI SAIDRLPLVP GVLEVVGIGY TGWFAYKNLI FKPDRETLIQ KVKDTYRDII GSN

Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)

001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Arabidopsis Description

CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.