CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
extracellular 1
mitochondrion 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G203500.2	Wheat	plastid	72.99	74.71
TraesCS1B01G214700.1	Wheat	plastid	71.84	74.4
TraesCS1A01G200000.2	Wheat	plastid	72.41	74.12
Os10t0536500-01	Rice	plasma membrane	72.41	73.26
Zm00001d029745_P004	Maize	plastid	77.01	70.53
HORVU1Hr1G051700.6	Barley	plastid	67.24	66.48
CDY27519	Canola	mitochondrion	34.48	46.88
VIT_15s0048g02500.t01	Wine grape	plastid	44.25	45.03
Solyc10g005050.2.1	Tomato	plastid	45.4	43.89
KRH06344	Soybean	plastid	41.38	42.86
KRH47772	Soybean	plastid	41.38	42.86
PGSC0003DMT400029398	Potato	plastid	44.25	42.78
CDY48012	Canola	plastid	39.66	41.32
Bra040482.1-P	Field mustard	plastid	39.66	41.32
GSMUA_AchrUn_...	Banana	plastid	39.66	41.07
EER97176	Sorghum	mitochondrion, plastid	34.48	40.82
GSMUA_Achr8P12340_001	Banana	plastid	40.23	40.0
CDY41562	Canola	plastid	41.95	39.89
CDY27520	Canola	plastid	35.63	39.49
AT2G46820.1	Thale cress	plastid	39.08	39.08
Bra004504.1-P	Field mustard	plastid	40.8	38.8
CDX80050	Canola	plastid	40.8	38.8
KRH68969	Soybean	cytosol	43.1	33.33
KRG97255	Soybean	plastid	36.21	31.34
EER89571	Sorghum	plastid	25.29	29.73
OQU87593	Sorghum	plastid	24.71	28.67
EES15027	Sorghum	mitochondrion	23.56	26.11
KXG30819	Sorghum	plastid	24.71	24.71
EER99031	Sorghum	mitochondrion, plastid	24.14	21.99
KXG31149	Sorghum	nucleus	26.44	13.26

Protein Annotations

EnsemblPlants:KXG39014	EnsemblPlantsGene:SORBI_3001G314200	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0009579
GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222	PANTHER:PTHR33222:SF6
PFAM:PF14159	ProteinID:KXG39014	ProteinID:KXG39014.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0001C80A5E
UniProt:A0A1B6QM72	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:60158933..60160458

Molecular Weight (calculated)

18563.5 Da

IEP (calculated)

9.076

GRAVY (calculated)

0.181

Length

174 amino acids

Sequence
(BLAST)

001: MAPAATGVGS LAAAPVAKGY TTYRKAAARS VVRLGLPALP PLPGLRLAAQ GQASFCECKR LARNVVAMAT GEPTAAPVAD NEELTEFVNA LKKEWDRIED
101: KYAVTTLAVA ATLAMWSAGG VVSAIDRLPL IPGLMEAVGI GYSGWFAYRN LLFKSDRDAF FAKVREVYED IIRS

Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)

001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Arabidopsis Description

CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.