CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48012	Canola	plastid	91.72	86.23
CDY27519	Canola	mitochondrion	64.33	78.91
AT2G46820.1	Thale cress	plastid	74.52	67.24
CDX80050	Canola	plastid	71.97	61.75
CDY41562	Canola	plastid	70.06	60.11
VIT_15s0048g02500.t01	Wine grape	plastid	59.87	54.97
KRH06344	Soybean	plastid	57.32	53.57
KRH47772	Soybean	plastid	56.69	52.98
Solyc10g005050.2.1	Tomato	plastid	57.32	50.0
PGSC0003DMT400029398	Potato	plastid	56.69	49.44
EER97176	Sorghum	mitochondrion, plastid	40.13	42.86
Os07t0469100-01	Rice	plastid	40.13	42.0
GSMUA_Achr8P12340_001	Banana	plastid	46.5	41.71
Zm00001d021370_P001	Maize	plastid	40.76	41.56
TraesCS2D01G238700.1	Wheat	plastid	38.22	41.38
KRG97255	Soybean	plastid	52.87	41.29
GSMUA_AchrUn_...	Banana	plastid	43.31	40.48
KRH68969	Soybean	cytosol	57.32	40.0
TraesCS1B01G214700.1	Wheat	plastid	40.13	37.5
TraesCS1D01G203500.2	Wheat	plastid	40.13	37.06
TraesCS1A01G200000.2	Wheat	plastid	39.49	36.47
KXG39014	Sorghum	plastid	39.49	35.63
TraesCS2A01G235000.2	Wheat	mitochondrion, plastid	37.58	35.54
HORVU1Hr1G051700.6	Barley	plastid	39.49	35.23
TraesCS2B01G256300.2	Wheat	mitochondrion, plastid	38.22	34.88
Os10t0536500-01	Rice	plasma membrane	35.03	31.98
CDY67261	Canola	plastid	28.66	31.03
CDY52984	Canola	plastid	28.03	30.34
Zm00001d029745_P004	Maize	plastid	35.03	28.95
CDY07178	Canola	plastid	29.94	27.98
CDY48508	Canola	plastid	28.03	27.16
CDX74360	Canola	plasma membrane, plastid	27.39	26.22
CDY53863	Canola	plastid	28.03	26.04
CDY01956	Canola	plastid	28.03	26.04
CDX91881	Canola	plastid	26.75	25.61
CDX90383	Canola	plastid	21.66	17.35
CDY52513	Canola	plastid	21.02	16.26

Protein Annotations

MapMan:35.1	GO:A0A078GLU6	UniProt:A0A078GLU6	InterPro:CAAD_dom	EnsemblPlants:CDY27520	ProteinID:CDY27520
ProteinID:CDY27520.1	InterPro:CURT1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0009579
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00038195001	PFAM:PF14159	PANTHER:PTHR33222	PANTHER:PTHR33222:SF9
TMHMM:TMhelix	UniParc:UPI0004EEF8D2	SEG:seg	:	:	:

Description

BnaC04g51610DBnaC04g51610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLU6]

Coordinates

chrLK032205:-:483717..484784

Molecular Weight (calculated)

16863.3 Da

IEP (calculated)

8.026

GRAVY (calculated)

0.117

Length

157 amino acids

Sequence
(BLAST)

001: MASLSISSSS TIINSRASPP PGQASFSSPS CISLPMLPPK PLQSTTCCRK IARRNVLTRA TEVEAPVTAE AETTELPEIV KTAQEAWEKV EDKYAIGSLA
101: FAALVALWGS TGLISAIDRL PLFPGVFELV GIGYTGWFVY KNMIFKPDRS SNLPSIT

Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)

001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Arabidopsis Description

CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.