Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G52220.1 | CDY21916 | AT1G03130.1 | 18813226 |
| AT1G52220.1 | CDY22079 | AT1G03130.1 | 18813226 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52984 | Canola | plastid | 97.93 | 97.93 |
| Bra018954.1-P | Field mustard | plastid | 97.24 | 97.24 |
| AT1G52220.1 | Thale cress | plastid | 84.14 | 78.21 |
| KRH47274 | Soybean | plastid | 61.38 | 61.38 |
| VIT_09s0002g04360.t01 | Wine grape | plastid | 57.24 | 56.85 |
| Solyc06g066620.2.1 | Tomato | plastid | 48.97 | 48.3 |
| GSMUA_Achr6P26770_001 | Banana | plastid | 48.28 | 48.28 |
| KRH44347 | Soybean | plastid | 50.34 | 43.2 |
| OQU87593 | Sorghum | plastid | 40.69 | 39.33 |
| TraesCS3D01G296900.1 | Wheat | plastid | 40.69 | 39.07 |
| TraesCS3B01G331600.1 | Wheat | plastid | 40.0 | 38.16 |
| Os01t0761000-01 | Rice | plastid | 38.62 | 37.09 |
| TraesCS3A01G304900.1 | Wheat | plastid | 38.62 | 36.84 |
| CDY27519 | Canola | mitochondrion | 31.03 | 35.16 |
| Zm00001d012689_P001 | Maize | plastid | 37.24 | 32.53 |
| CDY48012 | Canola | plastid | 36.55 | 31.74 |
| CDY41562 | Canola | plastid | 36.55 | 28.96 |
| CDX80050 | Canola | plastid | 36.55 | 28.96 |
| CDY27520 | Canola | plastid | 31.03 | 28.66 |
| CDY48508 | Canola | plastid | 28.97 | 25.93 |
| CDX74360 | Canola | plasma membrane, plastid | 28.97 | 25.61 |
| CDY53863 | Canola | plastid | 29.66 | 25.44 |
| CDY01956 | Canola | plastid | 29.66 | 25.44 |
| CDY07178 | Canola | plastid | 28.97 | 25.0 |
| CDX91881 | Canola | plastid | 28.28 | 25.0 |
| CDX90383 | Canola | plastid | 19.31 | 14.29 |
| CDY52513 | Canola | plastid | 18.62 | 13.3 |
Protein Annotations
| EnsemblPlants:CDY67261 | EnsemblPlantsGene:GSBRNA2T00060520001 | GO:A0A078JNF7 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0009579 | GO:GO:0016020 | GO:GO:0016021 | InterPro:CAAD_dom | InterPro:CURT1 | PANTHER:PTHR33222 |
| PANTHER:PTHR33222:SF3 | PFAM:PF14159 | ProteinID:CDY67261 | ProteinID:CDY67261.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EE2342 | UniProt:A0A078JNF7 | MapMan:35.1 | : | : | : |
Description
BnaC06g41080DBnaC06g41080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNF7]
Coordinates
chrLK035909:+:9268..10466
Molecular Weight (calculated)
15903.4 Da
IEP (calculated)
9.973
GRAVY (calculated)
0.174
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVSASLPP PLLLTQRKPN LTSVQKLPFS PIRDRRSHSM GLAVKASGKS SESSDLDVIS SIQNVWDKSE DRLGLIGLSF AAIVALWASL NIITAIDKLP
101: VISSGFELVG ILFSTWFTYR YLLFKPDREE LSQIVKKSVA DILGQ
101: VISSGFELVG ILFSTWFTYR YLLFKPDREE LSQIVKKSVA DILGQ
001: MASISATLPS PLLLTQRKSN LTSIQKLPFS LTRGTNDLSP LSLTRNPSSI SLMVKASGES SDSSTDLDVV STIQNVWDKS EDRLGLIGLG FAGIVALWAS
101: LNLITAIDKL PVISSGFELV GILFSTWFTY RYLLFKPDRQ ELSKIVKKSV ADILGQ
101: LNLITAIDKL PVISSGFELV GILFSTWFTY RYLLFKPDRQ ELSKIVKKSV ADILGQ
Arabidopsis Description
CURT1CCURT1C [Source:UniProtKB/TrEMBL;Acc:A0A178WBD4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.