Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22079 | Canola | plastid | 50.53 | 94.67 |
| AT4G02770.1 | Thale cress | plastid | 67.62 | 91.35 |
| AT1G03130.1 | Thale cress | plastid | 64.77 | 89.22 |
| KRG91274 | Soybean | nucleus, plastid | 53.74 | 74.38 |
| PGSC0003DMT400030843 | Potato | cytosol, extracellular, plastid | 53.74 | 72.95 |
| EER93246 | Sorghum | plastid | 51.96 | 72.64 |
| Os08t0560900-01 | Rice | extracellular, plastid | 52.31 | 72.41 |
| KRH35533 | Soybean | plastid | 54.09 | 72.38 |
| VIT_05s0020g03180.t01 | Wine grape | plastid | 52.31 | 72.06 |
| Solyc06g054260.1.1 | Tomato | plastid | 53.02 | 71.63 |
| TraesCS5D01G468400.1 | Wheat | plastid | 51.96 | 71.57 |
| GSMUA_Achr5P14780_001 | Banana | plastid | 52.67 | 71.5 |
| TraesCS5A01G457500.1 | Wheat | plastid | 51.96 | 71.22 |
| TraesCS5B01G466700.1 | Wheat | plastid | 51.96 | 71.22 |
| VIT_07s0151g01000.t01 | Wine grape | plastid | 51.6 | 71.08 |
| GSMUA_Achr4P17120_001 | Banana | plastid | 51.96 | 70.53 |
| Zm00001d034543_P001 | Maize | plastid | 48.4 | 68.34 |
| Zm00001d013039_P001 | Maize | plastid | 48.75 | 58.05 |
| HORVU5Hr1G109710.2 | Barley | cytosol, plastid | 46.26 | 47.45 |
Protein Annotations
| MapMan:1.1.4.2.4 | Gene3D:3.30.1470.10 | GO:A0A078G944 | UniProt:A0A078G944 | EnsemblPlants:CDY21916 | ProteinID:CDY21916 |
| ProteinID:CDY21916.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009522 | GO:GO:0009538 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 |
| EnsemblPlantsGene:GSBRNA2T00018242001 | PFAM:PF02531 | PANTHER:PTHR31982 | PANTHER:PTHR31982:SF4 | InterPro:PsaD | InterPro:PsaD_sf |
| SUPFAM:SSF64234 | UniParc:UPI0004EEE44B | SEG:seg | : | : | : |
Description
BnaC09g00220DBnaC09g00220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G944]
Coordinates
chrLK032126:-:93432..94665
Molecular Weight (calculated)
30724.5 Da
IEP (calculated)
9.562
GRAVY (calculated)
-0.403
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQASGLFS SAVTTAATSG VKKLHLFTTT HRPRSLSFPK TAIRAEKTDS AAAAAAPAAA VKEEAPVGFT PPQLDPNTPS PIFAGSTGGL LRKAQVEEFY
101: VITWNSPKEQ IFEMPTGGAA IMREGPNLLK LARKEQCLAL GTRLRSKYKI NYQFYRVFPN GEVQYLHPKD GVYPEKANAG REGVGQNMRS IGKNVSPIEV
201: KFTGKQSYDL YLTSFVDFVR KSRNGFLINK SDHPQEDANL GIQAVLELIE AKEDLKLDNS DIQATSYLET DTKSSSFTLN N
101: VITWNSPKEQ IFEMPTGGAA IMREGPNLLK LARKEQCLAL GTRLRSKYKI NYQFYRVFPN GEVQYLHPKD GVYPEKANAG REGVGQNMRS IGKNVSPIEV
201: KFTGKQSYDL YLTSFVDFVR KSRNGFLINK SDHPQEDANL GIQAVLELIE AKEDLKLDNS DIQATSYLET DTKSSSFTLN N
001: MATQAAGIFN SAITTAATSG VKKLHFFSTT HRPKSLSFTK TAIRAEKTDS SAAAAAAPAT KEAPVGFTPP QLDPNTPSPI FAGSTGGLLR KAQVEEFYVI
101: TWNSPKEQIF EMPTGGAAIM REGPNLLKLA RKEQCLALGT RLRSKYKITY QFYRVFPNGE VQYLHPKDGV YPEKANPGRE GVGLNMRSIG KNVSPIEVKF
201: TGKQSYDL
101: TWNSPKEQIF EMPTGGAAIM REGPNLLKLA RKEQCLALGT RLRSKYKITY QFYRVFPNGE VQYLHPKDGV YPEKANPGRE GVGLNMRSIG KNVSPIEVKF
201: TGKQSYDL
Arabidopsis Description
PSAD1Photosystem I reaction center subunit II-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7H1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.