Factsheet for AT4G02770.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G03130.1	Thale cress	plastid	91.83	93.63
CDY22079	Canola	plastid	63.46	88.0
KRG91274	Soybean	nucleus, plastid	72.12	73.89
PGSC0003DMT400030843	Potato	cytosol, extracellular, plastid	72.6	72.95
VIT_07s0151g01000.t01	Wine grape	plastid	71.15	72.55
VIT_05s0020g03180.t01	Wine grape	plastid	71.15	72.55
Solyc06g054260.1.1	Tomato	plastid	71.63	71.63
KRH35533	Soybean	plastid	72.12	71.43
Os08t0560900-01	Rice	extracellular, plastid	69.71	71.43
EER93246	Sorghum	plastid	67.79	70.15
GSMUA_Achr4P17120_001	Banana	plastid	69.71	70.05
GSMUA_Achr5P14780_001	Banana	plastid	69.71	70.05
TraesCS5D01G468400.1	Wheat	plastid	67.79	69.12
Zm00001d034543_P001	Maize	plastid	65.87	68.84
TraesCS5B01G466700.1	Wheat	plastid	67.79	68.78
TraesCS5A01G457500.1	Wheat	plastid	67.79	68.78
CDY21916	Canola	plastid	91.35	67.62
Bra036240.1-P	Field mustard	plastid	90.38	67.38
Zm00001d013039_P001	Maize	plastid	66.35	58.47
HORVU5Hr1G109710.2	Barley	cytosol, plastid	62.02	47.08

Protein Annotations

MapMan:1.1.4.2.4	Gene3D:3.30.1470.10	EntrezGene:828183	UniProt:A0A178UV45	ProteinID:AAD15351.1	ProteinID:AEE82228.1
EMBL:AF324675	EMBL:AF326887	EMBL:AF389290	EMBL:AJ245906	ArrayExpress:AT4G02770	EnsemblPlantsGene:AT4G02770
RefSeq:AT4G02770	TAIR:AT4G02770	RefSeq:AT4G02770-TAIR-G	EnsemblPlants:AT4G02770.1	TAIR:AT4G02770.1	EMBL:AY062512
EMBL:AY081671	EMBL:AY088533	EMBL:AY102159	EMBL:AY113939	ProteinID:CAB77762.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009522	GO:GO:0009534	GO:GO:0009535
GO:GO:0009536	GO:GO:0009538	GO:GO:0009579	GO:GO:0009941	GO:GO:0009987	GO:GO:0010287
GO:GO:0015979	GO:GO:0016020	GO:GO:0019904	RefSeq:NP_192186.1	ProteinID:OAO97493.1	PFAM:PF02531
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0006339	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	Symbol:PSAD-1	PANTHER:PTHR31982	PANTHER:PTHR31982:SF4
InterPro:PsaD	InterPro:PsaD_sf	UniProt:Q9S7H1	SUPFAM:SSF64234	UniParc:UPI0000000B6F	SEG:seg

Description

PSAD1Photosystem I reaction center subunit II-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7H1]

Coordinates

chr4:-:1229031..1230164

Molecular Weight (calculated)

22599.1 Da

IEP (calculated)

10.352

GRAVY (calculated)

-0.368

Length

208 amino acids

Sequence
(BLAST)

001: MATQAAGIFN SAITTAATSG VKKLHFFSTT HRPKSLSFTK TAIRAEKTDS SAAAAAAPAT KEAPVGFTPP QLDPNTPSPI FAGSTGGLLR KAQVEEFYVI
101: TWNSPKEQIF EMPTGGAAIM REGPNLLKLA RKEQCLALGT RLRSKYKITY QFYRVFPNGE VQYLHPKDGV YPEKANPGRE GVGLNMRSIG KNVSPIEVKF
201: TGKQSYDL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.