Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G02770.1 | Thale cress | plastid | 88.0 | 63.46 |
| AT1G03130.1 | Thale cress | plastid | 84.67 | 62.25 |
| Bra036240.1-P | Field mustard | plastid | 100.0 | 53.76 |
| CDY21916 | Canola | plastid | 94.67 | 50.53 |
| KRG91274 | Soybean | nucleus, plastid | 64.0 | 47.29 |
| KRH35533 | Soybean | plastid | 66.0 | 47.14 |
| PGSC0003DMT400030843 | Potato | cytosol, extracellular, plastid | 64.0 | 46.38 |
| Solyc06g054260.1.1 | Tomato | plastid | 62.67 | 45.19 |
| VIT_07s0151g01000.t01 | Wine grape | plastid | 61.33 | 45.1 |
| VIT_05s0020g03180.t01 | Wine grape | plastid | 61.33 | 45.1 |
| Os08t0560900-01 | Rice | extracellular, plastid | 60.67 | 44.83 |
| EER93246 | Sorghum | plastid | 60.0 | 44.78 |
| GSMUA_Achr5P14780_001 | Banana | plastid | 61.33 | 44.44 |
| TraesCS5D01G468400.1 | Wheat | plastid | 60.0 | 44.12 |
| TraesCS5A01G457500.1 | Wheat | plastid | 60.0 | 43.9 |
| TraesCS5B01G466700.1 | Wheat | plastid | 60.0 | 43.9 |
| GSMUA_Achr4P17120_001 | Banana | plastid | 60.0 | 43.48 |
| Zm00001d034543_P001 | Maize | plastid | 54.0 | 40.7 |
| Zm00001d013039_P001 | Maize | plastid | 55.33 | 35.17 |
| HORVU5Hr1G109710.2 | Barley | cytosol, plastid | 50.67 | 27.74 |
Protein Annotations
| MapMan:1.1.4.2.4 | Gene3D:3.30.1470.10 | GO:A0A078G9Q8 | UniProt:A0A078G9Q8 | EnsemblPlants:CDY22079 | ProteinID:CDY22079 |
| ProteinID:CDY22079.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009522 | GO:GO:0009538 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 |
| EnsemblPlantsGene:GSBRNA2T00018465001 | PFAM:PF02531 | PANTHER:PTHR31982 | PANTHER:PTHR31982:SF4 | InterPro:PsaD | InterPro:PsaD_sf |
| SUPFAM:SSF64234 | UniParc:UPI0004EE6BFB | SEG:seg | : | : | : |
Description
BnaA09g01080DBnaA09g01080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9Q8]
Coordinates
chrLK032127:-:464287..465292
Molecular Weight (calculated)
15823.9 Da
IEP (calculated)
10.174
GRAVY (calculated)
-0.193
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQASGLFS SAVTTAATSG VKKLHLFTTS HRPRSLSFPK TAIRAEKADS AAAAPAAAVK EEAPVGFTPP QLDPNTPSPI FAGSTGGLLR KAQVEEFYVI
101: TWNSPKEQIF EMPTGGAAIM REGVGQNMRS IGKNVSPIEV KFTGKQSYDL
101: TWNSPKEQIF EMPTGGAAIM REGVGQNMRS IGKNVSPIEV KFTGKQSYDL
001: MATQAAGIFN SAITTAATSG VKKLHFFSTT HRPKSLSFTK TAIRAEKTDS SAAAAAAPAT KEAPVGFTPP QLDPNTPSPI FAGSTGGLLR KAQVEEFYVI
101: TWNSPKEQIF EMPTGGAAIM REGPNLLKLA RKEQCLALGT RLRSKYKITY QFYRVFPNGE VQYLHPKDGV YPEKANPGRE GVGLNMRSIG KNVSPIEVKF
201: TGKQSYDL
101: TWNSPKEQIF EMPTGGAAIM REGPNLLKLA RKEQCLALGT RLRSKYKITY QFYRVFPNGE VQYLHPKDGV YPEKANPGRE GVGLNMRSIG KNVSPIEVKF
201: TGKQSYDL
Arabidopsis Description
PSAD1Photosystem I reaction center subunit II-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7H1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.