Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034543_P001 | Maize | plastid | 88.06 | 88.94 |
| Os08t0560900-01 | Rice | extracellular, plastid | 86.57 | 85.71 |
| TraesCS5A01G457500.1 | Wheat | plastid | 85.57 | 83.9 |
| TraesCS5B01G466700.1 | Wheat | plastid | 85.57 | 83.9 |
| TraesCS5D01G468400.1 | Wheat | plastid | 85.07 | 83.82 |
| KRG91274 | Soybean | nucleus, plastid | 76.12 | 75.37 |
| PGSC0003DMT400030843 | Potato | cytosol, extracellular, plastid | 76.12 | 73.91 |
| GSMUA_Achr5P14780_001 | Banana | plastid | 75.12 | 72.95 |
| KRH35533 | Soybean | plastid | 76.12 | 72.86 |
| Solyc06g054260.1.1 | Tomato | plastid | 75.12 | 72.6 |
| VIT_07s0151g01000.t01 | Wine grape | plastid | 73.63 | 72.55 |
| VIT_05s0020g03180.t01 | Wine grape | plastid | 73.63 | 72.55 |
| GSMUA_Achr4P17120_001 | Banana | plastid | 74.13 | 71.98 |
| Zm00001d013039_P001 | Maize | plastid | 80.1 | 68.22 |
| AT4G02770.1 | Thale cress | plastid | 70.15 | 67.79 |
| AT1G03130.1 | Thale cress | plastid | 68.66 | 67.65 |
| CDY22079 | Canola | plastid | 44.78 | 60.0 |
| Bra036240.1-P | Field mustard | plastid | 72.64 | 52.33 |
| CDY21916 | Canola | plastid | 72.64 | 51.96 |
| HORVU5Hr1G109710.2 | Barley | cytosol, plastid | 68.66 | 50.37 |
Protein Annotations
| MapMan:1.1.4.2.4 | Gene3D:3.30.1470.10 | UniProt:C5WW56 | EnsemblPlants:EER93246 | ProteinID:EER93246 | ProteinID:EER93246.2 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009522 | GO:GO:0009538 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 |
| GO:GO:0046658 | PFAM:PF02531 | PANTHER:PTHR31982 | PANTHER:PTHR31982:SF4 | InterPro:PsaD | InterPro:PsaD_sf |
| EnsemblPlantsGene:SORBI_3001G046900 | SUPFAM:SSF64234 | unigene:Sbi.8093 | UniParc:UPI0001FCD624 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:3459853..3462910
Molecular Weight (calculated)
21834.2 Da
IEP (calculated)
10.204
GRAVY (calculated)
-0.394
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMATQASAA TRHLLAAAWA KPRQLSSQLA MPSSRGPAPL RASDDGPAAA AVTEEAPKGF VPPQLDPNTP SPIFGGSTGG LLRKAQVEEF YVITWTSPKE
101: QVFEMPTGGA AIMREGPNLL KLARKEQCLA LGTRLRSKYK INYQFYRVFP NGEVQYLHPK DGVYPEKVNA GRQGVGQNFR SIGKNVSPIE VKFTGKESFD
201: I
101: QVFEMPTGGA AIMREGPNLL KLARKEQCLA LGTRLRSKYK INYQFYRVFP NGEVQYLHPK DGVYPEKVNA GRQGVGQNFR SIGKNVSPIE VKFTGKESFD
201: I
001: MATQAAGIFS PAITTTTSAV KKLHLFSSSH RPKSLSFTKT AIRAEKTESS SAAPAVKEAP VGFTPPQLDP NTPSPIFAGS TGGLLRKAQV EEFYVITWNS
101: PKEQIFEMPT GGAAIMREGP NLLKLARKEQ CLALGTRLRS KYKITYQFYR VFPNGEVQYL HPKDGVYPEK ANPGREGVGL NMRSIGKNVS PIEVKFTGKQ
201: SYDL
101: PKEQIFEMPT GGAAIMREGP NLLKLARKEQ CLALGTRLRS KYKITYQFYR VFPNGEVQYL HPKDGVYPEK ANPGREGVGL NMRSIGKNVS PIEVKFTGKQ
201: SYDL
Arabidopsis Description
PSAD2Photosystem I reaction center subunit II-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SA56]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.