CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
golgi 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, plastid, vacuole
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	golgi
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89811
EER93246
EES19841
KXG31516
KXG33320
OQU84758

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G52220.1	EER93246	AT1G03130.1	18813226
AT1G52220.1	EER89811	AT5G41600.1	21798944
AT1G52220.1	EES19841	AT5G41600.1	21798944
AT1G52220.1	KXG31516	AT5G41600.1	21798944
AT1G52220.1	KXG33320	AT5G41600.1	21798944
AT1G52220.1	OQU84758	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012689_P001	Maize	plastid	89.33	80.72
Os01t0761000-01	Rice	plastid	70.0	69.54
TraesCS3B01G331600.1	Wheat	plastid	68.0	67.11
TraesCS3D01G296900.1	Wheat	plastid	67.33	66.89
TraesCS3A01G304900.1	Wheat	plastid	66.0	65.13
GSMUA_Achr6P26770_001	Banana	plastid	44.0	45.52
VIT_09s0002g04360.t01	Wine grape	plastid	44.0	45.21
KRH47274	Soybean	plastid	41.33	42.76
CDY52984	Canola	plastid	40.0	41.38
Bra018954.1-P	Field mustard	plastid	40.0	41.38
CDY67261	Canola	plastid	39.33	40.69
AT1G52220.1	Thale cress	plastid	41.33	39.74
Solyc06g066620.2.1	Tomato	plastid	33.33	34.01
KRH44347	Soybean	plastid	36.0	31.95
EER97176	Sorghum	mitochondrion, plastid	30.67	31.29
EER89571	Sorghum	plastid	24.67	25.0
KXG39014	Sorghum	plastid	28.67	24.71
EES15027	Sorghum	mitochondrion	22.67	21.66
KXG30819	Sorghum	plastid	22.0	18.97
EER99031	Sorghum	mitochondrion, plastid	19.33	15.18
KXG31149	Sorghum	nucleus	26.0	11.24

Protein Annotations

MapMan:35.2	EntrezGene:8079228	UniProt:A0A1W0VZP4	InterPro:CAAD_dom	InterPro:CURT1	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	EnsemblPlants:OQU87593	ProteinID:OQU87593	ProteinID:OQU87593.1
PFAM:PF14159	PANTHER:PTHR33222	PANTHER:PTHR33222:SF3	EnsemblPlantsGene:SORBI_3003G303700	TMHMM:TMhelix	UniParc:UPI0001A84A31
RefSeq:XP_002456389.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:63403753..63405797

Molecular Weight (calculated)

16108.8 Da

IEP (calculated)

10.220

GRAVY (calculated)

0.429

Length

150 amino acids

Sequence
(BLAST)

001: MMMACGLAVA QPAASLAPSG KRSLSGGRPP WLPSPRLFSD KLIRSRSVVA KAAQDSSESS GSIVKYVTSS FSTAEDIFGL AGIGFAAIAA LWASVNLIEI
101: IDKLPVLPLL FELVGILVAW LFIYNNLLFK PKREEFLKNI KNSVSQILGQ

Best Arabidopsis Sequence Match ( AT1G52220.1 )
(BLAST)

001: MASISATLPS PLLLTQRKSN LTSIQKLPFS LTRGTNDLSP LSLTRNPSSI SLMVKASGES SDSSTDLDVV STIQNVWDKS EDRLGLIGLG FAGIVALWAS
101: LNLITAIDKL PVISSGFELV GILFSTWFTY RYLLFKPDRQ ELSKIVKKSV ADILGQ

Arabidopsis Description

CURT1CCURT1C [Source:UniProtKB/TrEMBL;Acc:A0A178WBD4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.