CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032232_P007	Maize	mitochondrion	87.9	87.34
EER89571	Sorghum	plastid	42.04	44.59
KXG30819	Sorghum	plastid	40.13	36.21
Solyc03g007830.2.1	Tomato	plastid	36.31	32.2
PGSC0003DMT400016846	Potato	plastid	35.03	30.39
EER97176	Sorghum	mitochondrion, plastid	25.48	27.21
KXG39014	Sorghum	plastid	26.11	23.56
OQU87593	Sorghum	plastid	21.66	22.67
EER99031	Sorghum	mitochondrion, plastid	27.39	22.51
KXG31149	Sorghum	nucleus	31.21	14.12

Protein Annotations

EnsemblPlants:EES15027	EnsemblPlantsGene:SORBI_3007G134100	EntrezGene:8075652	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222
PANTHER:PTHR33222:SF20	PFAM:PF14159	ProteinID:EES15027	ProteinID:EES15027.1	RefSeq:XP_002445532.1	SEG:seg
TMHMM:TMhelix	unigene:Sbi.11746	UniParc:UPI0001A87B19	UniProt:C5YL53	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr7:-:55809656..55816616

Molecular Weight (calculated)

17401.9 Da

IEP (calculated)

5.306

GRAVY (calculated)

-0.048

Length

157 amino acids

Sequence
(BLAST)

001: MVAAAAAVRS VSLRRVGSLL RAPVPSGLTT SRVAAPFPRR TDSMKISQLQ LTATRFSKEN NSDEDDELLS ELRDKWDAME NKSSLALYGA GAILTVWISL
101: VVVKSLDSVP LLPGLLELVG LSYSGWFVYR YLLFQENRKE LAELIDDTKR KIIGDDD

Best Arabidopsis Sequence Match ( AT4G01150.1 )
(BLAST)

001: MAISVAASSS MAVMVPRVPA VSTRCSAVPY LPPRSFGRSS FTVPLKLVSG NGLQKVELLK TRASSEETSS IDTNELITDL KEKWDGLENK STVLIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE

Arabidopsis Description

CURT1AProtein CURVATURE THYLAKOID 1A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04616]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.