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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 6
  • plasma membrane 1
  • golgi 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d005926_P001 Maize plastid 86.91 91.71
Os09t0465800-01 Rice plastid 70.16 74.03
TraesCS5A01G247100.1 Wheat plastid 67.54 70.49
TraesCS5D01G253600.1 Wheat plastid 67.02 69.95
TraesCS5B01G244200.1 Wheat mitochondrion, plastid 67.02 69.95
GSMUA_Achr5P17930_001 Banana cytosol 26.7 45.13
HORVU0Hr1G013240.2 Barley cytosol 47.64 43.13
GSMUA_Achr6P04200_001 Banana cytosol 26.7 37.23
Bra010636.1-P Field mustard plastid 33.51 33.51
CDX90383 Canola plastid 33.51 32.65
AT4G38100.1 Thale cress plastid 32.98 32.64
CDY52513 Canola plastid 33.51 31.53
KXG30819 Sorghum plastid 26.7 29.31
EER89571 Sorghum plastid 22.51 29.05
KRH74509 Soybean plastid 29.32 28.43
KRH69655 Soybean endoplasmic reticulum 29.32 28.0
EES15027 Sorghum mitochondrion 22.51 27.39
VIT_00s0199g00110.t01 Wine grape plastid 28.8 26.96
VIT_00s0199g00150.t01 Wine grape plastid 28.8 26.96
EER97176 Sorghum mitochondrion, plastid 18.85 24.49
KXG39014 Sorghum plastid 21.99 24.14
GSMUA_Achr7P12860_001 Banana plastid 27.75 22.27
OQU87593 Sorghum plastid 15.18 19.33
KXG31149 Sorghum nucleus 24.08 13.26
Solyc11g010480.1.1 Tomato plastid 27.23 10.0
PGSC0003DMT400041783 Potato plastid 26.7 6.66
Protein Annotations
MapMan:35.1EntrezGene:8063724UniProt:C5X2Z5InterPro:CAAD_domInterPro:CURT1EnsemblPlants:EER99031
ProteinID:EER99031ProteinID:EER99031.1GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0009535GO:GO:0009536GO:GO:0009579GO:GO:0016020GO:GO:0016021PFAM:PF14159
PANTHER:PTHR33222PANTHER:PTHR33222:SF2EnsemblPlantsGene:SORBI_3002G230800TMHMM:TMhelixUniParc:UPI0001A8419ARefSeq:XP_002462510.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:62211988..62216495
Molecular Weight (calculated)
20433.4 Da
IEP (calculated)
4.740
GRAVY (calculated)
-0.058
Length
191 amino acids
Sequence
(BLAST)
001: MALAARAALV RVLPPPRPSP ISQPKQQLKQ GLGGRGGASL AVRAKDSDDF GALLSEKPAA PAQAPAKRDG WEGFGREASS VEVEEKEEVE VEVQGEPASS
101: WGVLNQIGVE LDSDKSYSAL VYGTSAVVAI WISSIVVSAL DSVPLVPQVM EVVGLGFTIW FTSRYLIFKE NRDELITRVS SIKKQILGSD N
Best Arabidopsis Sequence Match ( AT4G38100.1 )
(BLAST)
001: MELCTRSTTI ITHLPASFNG HGYLAGKSVD RISLPLQRNV ASLVLQSRTL RCSRKFPGET VTEETSTGVN EFGVEDRDGV VVAAEEKNSN SEAPQAEDEE
101: TQALEFLNDI KLDSDKTYSI LLYGSGAIVA LYLTSAIVSS LEAIPLFPKL MEVVGLGYTL WFTTRYLLFK RNREELKTKV SEIKKQVLGS DSE
Arabidopsis Description
CURT1DProtein CURVATURE THYLAKOID 1D, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDD3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.