Factsheet for TraesCS5D01G253600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 16595579
plastid: 18419817

msms PMID: 18419817 doi

FM Dupont

Western Regional Research Center, United States Department of Agriculture, Agricultural Research Service, 800 Buchanan Street, Albany, CA 94710K, USA.

msms PMID: 16595579 doi

Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G244200.1	Wheat	mitochondrion, plastid	94.54	94.54
TraesCS5A01G247100.1	Wheat	plastid	93.99	93.99
Os09t0465800-01	Rice	plastid	73.22	74.03
Zm00001d005926_P001	Maize	plastid	67.76	68.51
EER99031	Sorghum	mitochondrion, plastid	69.95	67.02
HORVU0Hr1G013240.2	Barley	cytosol	64.48	55.92
GSMUA_Achr5P17930_001	Banana	cytosol	27.32	44.25
GSMUA_Achr6P04200_001	Banana	cytosol	28.42	37.96
Bra010636.1-P	Field mustard	plastid	34.97	33.51
CDX90383	Canola	plastid	34.97	32.65
AT4G38100.1	Thale cress	plastid	33.33	31.61
CDY52513	Canola	plastid	33.88	30.54
TraesCS6D01G273900.1	Wheat	plastid	26.23	30.0
TraesCS7D01G177200.1	Wheat	plastid	26.78	28.66
TraesCS7D01G209600.1	Wheat	plastid	24.59	28.48
KRH69655	Soybean	endoplasmic reticulum	30.6	28.0
TraesCS7D01G177300.1	Wheat	plastid	25.68	27.65
KRH74509	Soybean	plastid	29.51	27.41
VIT_00s0199g00110.t01	Wine grape	plastid	28.96	25.98
VIT_00s0199g00150.t01	Wine grape	plastid	28.96	25.98
TraesCS2D01G238700.1	Wheat	plastid	19.13	24.14
TraesCS1D01G203500.2	Wheat	plastid	22.4	24.12
TraesCS6D01G293900.1	Wheat	plastid	24.59	23.56
GSMUA_Achr7P12860_001	Banana	plastid	28.96	22.27
TraesCS3D01G296900.1	Wheat	plastid	16.39	19.87
Solyc11g010480.1.1	Tomato	plastid	30.6	10.77
PGSC0003DMT400041783	Potato	plastid	30.6	7.31

Protein Annotations

EnsemblPlants:TraesCS5D01G253600.1	EnsemblPlantsGene:TraesCS5D01G253600	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	InterPro:CAAD_dom	InterPro:CURT1
PANTHER:PTHR33222	PANTHER:PTHR33222:SF2	PFAM:PF14159	SEG:seg	MapMan:35.2	:

Description

No Description!

Coordinates

chr5D:+:360533618..360537945

Molecular Weight (calculated)

19501.1 Da

IEP (calculated)

4.807

GRAVY (calculated)

-0.093

Length

183 amino acids

Sequence
(BLAST)

001: MAPSASHAGA ALVRLPPRPA PSSLPQQGFG RAGASLLAVR ATKDSDGFRP LVSEKPEWPA PPPAKREGLD GFGREASNGE EDGQAQGELA PWSVLNQLGV
101: ELDSDSSYTA LVYGSSAIVA IWISSIVVSA LESVPVVPQV MEVVGLGFTV WFTSRYLIFK ENRDELITRI GSIKRQVLGS RDD

Best Arabidopsis Sequence Match ( AT4G38100.1 )
(BLAST)

001: MELCTRSTTI ITHLPASFNG HGYLAGKSVD RISLPLQRNV ASLVLQSRTL RCSRKFPGET VTEETSTGVN EFGVEDRDGV VVAAEEKNSN SEAPQAEDEE
101: TQALEFLNDI KLDSDKTYSI LLYGSGAIVA LYLTSAIVSS LEAIPLFPKL MEVVGLGYTL WFTTRYLLFK RNREELKTKV SEIKKQVLGS DSE

Arabidopsis Description

CURT1DProtein CURVATURE THYLAKOID 1D, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDD3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.