Factsheet for TraesCS7D01G209600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G346800.3
TraesCS1B01G360800.1
TraesCS1D01G349700.1
TraesCS3A01G151200.1
TraesCS3A01G278800.1
TraesCS3B01G178100.1
TraesCS3B01G313000.1
TraesCS3D01G159100.1
TraesCS3D01G279100.1
TraesCS7A01G341800.1
TraesCS7B01G241100.1
TraesCS7D01G337800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01150.1	TraesCS1A01G346800.3	AT5G41600.1	21798944
AT4G01150.1	TraesCS1B01G360800.1	AT5G41600.1	21798944
AT4G01150.1	TraesCS1D01G349700.1	AT5G41600.1	21798944
AT4G01150.1	TraesCS3A01G151200.1	AT5G41600.1	21798944
AT4G01150.1	TraesCS3A01G278800.1	AT5G41600.1	21798944
AT4G01150.1	TraesCS3B01G178100.1	AT5G41600.1	21798944
AT4G01150.1	TraesCS3B01G313000.1	AT5G41600.1	21798944
AT4G01150.1	TraesCS3D01G159100.1	AT5G41600.1	21798944
AT4G01150.1	TraesCS3D01G279100.1	AT5G41600.1	21798944
AT4G01150.1	TraesCS7A01G341800.1	AT5G41600.1	21798944
AT4G01150.1	TraesCS7B01G241100.1	AT5G41600.1	21798944
AT4G01150.1	TraesCS7D01G337800.1	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G114100.1	Wheat	plastid	98.73	98.73
TraesCS7A01G206700.1	Wheat	plastid	98.73	98.73
EER89571	Sorghum	plastid	80.38	85.81
Zm00001d037323_P001	Maize	plastid	79.75	85.14
Os06t0264800-01	Rice	plastid	82.91	83.97
Zm00001d027456_P001	Maize	plastid	76.58	80.67
TraesCS6D01G273900.1	Wheat	plastid	68.99	68.12
PGSC0003DMT400000589	Potato	plastid	56.96	53.89
GSMUA_Achr10P...	Banana	plastid	58.23	52.87
KRH06541	Soybean	plastid	54.43	52.76
KRH47985	Soybean	plastid	54.43	52.76
GSMUA_Achr3P20270_001	Banana	plastid	56.33	52.66
VIT_16s0050g02240.t01	Wine grape	plastid	53.16	52.17
AT4G01150.1	Thale cress	plastid	53.8	51.83
Solyc01g095430.2.1	Tomato	plastid	55.06	51.18
Solyc10g011770.2.1	Tomato	plastid	54.43	50.89
CDX74360	Canola	plasma membrane, plastid	52.53	50.61
Bra000947.1-P	Field mustard	plastid	51.9	50.0
VIT_15s0046g01470.t01	Wine grape	plastid	52.53	50.0
CDX91881	Canola	plastid	51.27	49.39
CDY48508	Canola	plastid	50.63	49.38
Bra037380.1-P	Field mustard	plastid	50.63	49.38
CDY53863	Canola	plastid	51.27	47.93
Bra008533.1-P	Field mustard	plastid	51.27	47.93
CDY01956	Canola	plastid	51.27	47.93
CDY07178	Canola	plastid	50.63	47.62
GSMUA_Achr7P18720_001	Banana	plastid	56.33	38.2
TraesCS2D01G238700.1	Wheat	plastid	27.22	29.66
TraesCS7D01G177300.1	Wheat	plastid	30.38	28.24
TraesCS7D01G177200.1	Wheat	plastid	29.75	27.49
TraesCS6D01G293900.1	Wheat	plastid	29.75	24.61
TraesCS5D01G253600.1	Wheat	plastid	28.48	24.59
TraesCS1D01G203500.2	Wheat	plastid	25.95	24.12
TraesCS3D01G296900.1	Wheat	plastid	21.52	22.52

Protein Annotations

EnsemblPlants:TraesCS7D01G209600.1	EnsemblPlantsGene:TraesCS7D01G209600	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0009579
InterPro:CAAD_dom	InterPro:CURT1	ncoils:Coil	PANTHER:PTHR33222	PANTHER:PTHR33222:SF4	PFAM:PF14159
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7D:-:167556946..167557793

Molecular Weight (calculated)

16994.6 Da

IEP (calculated)

9.825

GRAVY (calculated)

0.097

Length

158 amino acids

Sequence
(BLAST)

001: MAATAYSVAL LGGARLPAAT GNAAPRSSAF LPRRNLHPLR LQGAHAYAPR PSLLRVKAAS DDTSASGDEI IEDLKGKWEA IEDKPTFLLY SGGAVVALWL
101: TTVVVGAINS VPLLPKLLEL VGLGYTGWFV YRYLLFKESR KELATDIESL KKKIAGTE

Best Arabidopsis Sequence Match ( AT4G01150.1 )
(BLAST)

001: MAISVAASSS MAVMVPRVPA VSTRCSAVPY LPPRSFGRSS FTVPLKLVSG NGLQKVELLK TRASSEETSS IDTNELITDL KEKWDGLENK STVLIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE

Arabidopsis Description

CURT1AProtein CURVATURE THYLAKOID 1A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04616]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.