CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74360	Canola	plasma membrane, plastid	95.73	95.73
CDY53863	Canola	plastid	92.07	89.35
CDY01956	Canola	plastid	91.46	88.76
CDY48508	Canola	plastid	87.2	88.27
CDY07178	Canola	plastid	90.24	88.1
AT4G01150.1	Thale cress	plastid	87.2	87.2
Os02t0731600-01	Rice	cytosol	48.17	73.15
PGSC0003DMT400000589	Potato	plastid	67.68	66.47
KRH47985	Soybean	plastid	64.02	64.42
KRH06541	Soybean	plastid	63.41	63.8
Solyc01g095430.2.1	Tomato	plastid	65.85	63.53
VIT_16s0050g02240.t01	Wine grape	plastid	60.98	62.11
VIT_15s0046g01470.t01	Wine grape	plastid	61.59	60.84
EER89571	Sorghum	plastid	52.44	58.11
Solyc10g011770.2.1	Tomato	plastid	59.76	57.99
Zm00001d051785_P001	Maize	plastid	55.49	57.96
Zm00001d037323_P001	Maize	plastid	51.83	57.43
TraesCS6A01G292800.2	Wheat	plastid	53.05	55.41
TraesCS6B01G323200.2	Wheat	plastid	52.44	54.78
Zm00001d027456_P001	Maize	plastid	50.0	54.67
TraesCS6D01G273900.1	Wheat	plastid	53.05	54.38
GSMUA_Achr10P...	Banana	plastid	56.71	53.45
Os06t0264800-01	Rice	plastid	50.61	53.21
GSMUA_Achr3P20270_001	Banana	plastid	53.66	52.07
TraesCS7A01G206700.1	Wheat	plastid	50.0	51.9
TraesCS7B01G114100.1	Wheat	plastid	49.39	51.27
TraesCS7D01G209600.1	Wheat	plastid	49.39	51.27
KXG30819	Sorghum	plastid	54.27	51.15
GSMUA_Achr7P18720_001	Banana	plastid	56.1	39.48
HORVU6Hr1G073100.4	Barley	plastid	56.1	32.74
CDY52984	Canola	plastid	25.61	28.97
CDY67261	Canola	plastid	25.0	28.28
CDX90383	Canola	plastid	32.93	27.55
CDY27520	Canola	plastid	25.61	26.75
CDY27519	Canola	mitochondrion	20.73	26.56
CDY48012	Canola	plastid	26.22	25.75
CDY41562	Canola	plastid	28.66	25.68
CDX80050	Canola	plastid	28.66	25.68
CDY52513	Canola	plastid	31.71	25.62

Protein Annotations

EnsemblPlants:CDX91881	EnsemblPlantsGene:GSBRNA2T00153505001	GO:A0A078DRF2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	ncoils:Coil
PANTHER:PTHR33222	PANTHER:PTHR33222:SF4	PFAM:PF14159	ProteinID:CDX91881	ProteinID:CDX91881.1	TMHMM:TMhelix
UniParc:UPI0004EDF9B8	MapMan:35.1	:	:	:	:

Description

BnaC03g31830D

Coordinates

chrLK031870:+:589020..590349

Molecular Weight (calculated)

17773.7 Da

IEP (calculated)

9.658

GRAVY (calculated)

0.189

Length

164 amino acids

Sequence
(BLAST)

001: MTVAASSSMA VMIPRVPSIS ARCSAVPYLP PRSFGRSSFT VPVKLLSGNG LHKVELMKTR ASSSDETSIA IDTNELFTDL KEKWDGLENK STVIIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIDSLKKKI AGTE

Best Arabidopsis Sequence Match ( AT4G01150.1 )
(BLAST)

001: MAISVAASSS MAVMVPRVPA VSTRCSAVPY LPPRSFGRSS FTVPLKLVSG NGLQKVELLK TRASSEETSS IDTNELITDL KEKWDGLENK STVLIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE

Arabidopsis Description

CURT1AProtein CURVATURE THYLAKOID 1A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04616]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.