CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH41254
KRH59988

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01150.1	KRH41254	AT5G41600.1	21798944
AT4G01150.1	KRH59988	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06541	Soybean	plastid	93.86	93.86
Os02t0731600-01	Rice	cytosol	47.24	71.3
AT4G01150.1	Thale cress	plastid	69.33	68.9
VIT_16s0050g02240.t01	Wine grape	plastid	66.87	67.7
PGSC0003DMT400000589	Potato	plastid	68.71	67.07
VIT_15s0046g01470.t01	Wine grape	plastid	67.48	66.27
Bra037380.1-P	Field mustard	plastid	63.8	64.2
CDY48508	Canola	plastid	63.8	64.2
Solyc01g095430.2.1	Tomato	plastid	66.87	64.12
CDX74360	Canola	plasma membrane, plastid	64.42	64.02
CDX91881	Canola	plastid	64.42	64.02
Bra000947.1-P	Field mustard	plastid	63.8	63.41
CDY07178	Canola	plastid	65.03	63.1
EER89571	Sorghum	plastid	56.44	62.16
CDY53863	Canola	plastid	64.42	62.13
Bra008533.1-P	Field mustard	plastid	64.42	62.13
Zm00001d037323_P001	Maize	plastid	55.83	61.49
Solyc10g011770.2.1	Tomato	plastid	63.19	60.95
CDY01956	Canola	plastid	63.19	60.95
Zm00001d051785_P001	Maize	plastid	57.67	59.87
Zm00001d027456_P001	Maize	plastid	53.37	58.0
GSMUA_Achr10P...	Banana	plastid	60.12	56.32
Os06t0264800-01	Rice	plastid	53.37	55.77
TraesCS6A01G292800.2	Wheat	plastid	53.37	55.41
TraesCS6B01G323200.2	Wheat	plastid	52.76	54.78
GSMUA_Achr3P20270_001	Banana	plastid	56.44	54.44
TraesCS7D01G209600.1	Wheat	plastid	52.76	54.43
TraesCS7B01G114100.1	Wheat	plastid	52.76	54.43
TraesCS7A01G206700.1	Wheat	plastid	52.76	54.43
TraesCS6D01G273900.1	Wheat	plastid	52.76	53.75
KXG30819	Sorghum	plastid	56.44	52.87
GSMUA_Achr7P18720_001	Banana	plastid	60.12	42.06
HORVU6Hr1G073100.4	Barley	plastid	55.21	32.03
KRH47274	Soybean	plastid	28.22	31.72
KRH47772	Soybean	plastid	28.22	27.38
KRH06344	Soybean	plastid	28.22	27.38
KRH74509	Soybean	plastid	32.52	26.9
KRH69655	Soybean	endoplasmic reticulum	31.9	26.0
KRH44347	Soybean	plastid	23.93	23.08
KRH68969	Soybean	cytosol	26.38	19.11
KRG97255	Soybean	plastid	22.7	18.41

Protein Annotations

EMBL:ACUP02004185	EnsemblPlants:KRH47985	EnsemblPlantsGene:GLYMA_07G060700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222
PANTHER:PTHR33222:SF4	PFAM:PF14159	ProteinID:KRH47985	ProteinID:KRH47985.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI00023C73D6	UniProt:I1KI04	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:5387226..5390325

Molecular Weight (calculated)

17697.4 Da

IEP (calculated)

9.957

GRAVY (calculated)

0.103

Length

163 amino acids

Sequence
(BLAST)

001: MAAAAAVTVL LPPRIPTTTN VTRCSALPSL PPRVSNTKTT LFSPSLNNFS VSRKSSLLQT RASSEESSSV DANEVFTDLK EKWDALENKS TVLLYGGGAI
101: VAIWLSSILV SAINSVPLLP KIMELVGLGY TGWFVYRYLL FKSSRKELAT DIESLKKKIT GTE

Best Arabidopsis Sequence Match ( AT4G01150.1 )
(BLAST)

001: MAISVAASSS MAVMVPRVPA VSTRCSAVPY LPPRSFGRSS FTVPLKLVSG NGLQKVELLK TRASSEETSS IDTNELITDL KEKWDGLENK STVLIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE

Arabidopsis Description

CURT1AProtein CURVATURE THYLAKOID 1A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04616]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.