CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06344	Soybean	plastid	51.24	61.31
KRH47772	Soybean	plastid	49.75	59.52
VIT_15s0048g02500.t01	Wine grape	plastid	49.75	58.48
CDY27520	Canola	plastid	41.29	52.87
CDY27519	Canola	mitochondrion	33.33	52.34
PGSC0003DMT400029398	Potato	plastid	46.77	52.22
Solyc10g005050.2.1	Tomato	plastid	46.77	52.22
AT2G46820.1	Thale cress	plastid	44.78	51.72
CDY41562	Canola	plastid	46.77	51.37
CDX80050	Canola	plastid	46.77	51.37
KRH68969	Soybean	cytosol	57.21	51.11
Bra004504.1-P	Field mustard	plastid	46.27	50.82
CDY48012	Canola	plastid	41.79	50.3
Bra040482.1-P	Field mustard	plastid	41.79	50.3
GSMUA_Achr8P12340_001	Banana	plastid	38.81	44.57
GSMUA_AchrUn_...	Banana	plastid	34.83	41.67
Os07t0469100-01	Rice	plastid	28.36	38.0
EER97176	Sorghum	mitochondrion, plastid	27.36	37.41
Zm00001d021370_P001	Maize	plastid	28.36	37.01
KXG39014	Sorghum	plastid	31.34	36.21
TraesCS2D01G238700.1	Wheat	plastid	25.87	35.86
TraesCS1B01G214700.1	Wheat	plastid	29.85	35.71
TraesCS2A01G235000.2	Wheat	mitochondrion, plastid	29.35	35.54
TraesCS1D01G203500.2	Wheat	plastid	29.85	35.29
TraesCS1A01G200000.2	Wheat	plastid	29.35	34.71
KRH47274	Soybean	plastid	24.38	33.79
Os10t0536500-01	Rice	plasma membrane	28.36	33.14
HORVU1Hr1G051700.6	Barley	plastid	27.86	31.82
TraesCS2B01G256300.2	Wheat	mitochondrion, plastid	25.87	30.23
Zm00001d029745_P004	Maize	plastid	26.37	27.89
KRH44347	Soybean	plastid	22.39	26.63
KRH47985	Soybean	plastid	18.41	22.7
KRH06541	Soybean	plastid	18.41	22.7
KRH74509	Soybean	plastid	17.41	17.77
KRH69655	Soybean	endoplasmic reticulum	16.42	16.5

Protein Annotations

EMBL:ACUP02012181	EnsemblPlants:KRG97255	EnsemblPlantsGene:GLYMA_19G260600	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222
PANTHER:PTHR33222:SF9	PFAM:PF14159	ProteinID:KRG97255	ProteinID:KRG97255.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI00023DD81D	UniProt:I1NCR6	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:50380574..50382103

Molecular Weight (calculated)

21545.3 Da

IEP (calculated)

8.310

GRAVY (calculated)

0.358

Length

201 amino acids

Sequence
(BLAST)

001: MASTSSSTLS ISSSSTLVDA KAPSPRQSPQ CVSPPPVHSP WKTTAFCRRI ASNVMAMATT REAPAAEVAT TELSVAETPE IVKTIQEAWD KVEDKYAVSS
101: LAVAGVVALV GSAGMISAID RLPLIPGVLE VVGIGYSGVS SLNFTVAISC MRLLDKSVFP YLICLLHIIL YFNSRMIVYI FTLLNYQSKA ELLPRKMNNS
201: S

Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)

001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Arabidopsis Description

CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.