Factsheet for VIT_15s0048g02500.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
extracellular 1
golgi 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47772	Soybean	plastid	69.59	70.83
KRH06344	Soybean	plastid	69.01	70.24
PGSC0003DMT400029398	Potato	plastid	71.93	68.33
Solyc10g005050.2.1	Tomato	plastid	71.93	68.33
CDX80050	Canola	plastid	69.59	65.03
Bra004504.1-P	Field mustard	plastid	69.01	64.48
CDY41562	Canola	plastid	69.01	64.48
AT2G46820.1	Thale cress	plastid	65.5	64.37
CDY27519	Canola	mitochondrion	46.78	62.5
CDY48012	Canola	plastid	60.82	62.28
Bra040482.1-P	Field mustard	plastid	60.82	62.28
CDY27520	Canola	plastid	54.97	59.87
GSMUA_Achr8P12340_001	Banana	plastid	57.31	56.0
GSMUA_AchrUn_...	Banana	plastid	54.97	55.95
EER97176	Sorghum	mitochondrion, plastid	45.61	53.06
KRH68969	Soybean	cytosol	68.42	52.0
Zm00001d021370_P001	Maize	plastid	46.78	51.95
TraesCS2D01G238700.1	Wheat	plastid	42.69	50.34
Os07t0469100-01	Rice	plastid	43.86	50.0
KRG97255	Soybean	plastid	58.48	49.75
TraesCS1B01G214700.1	Wheat	plastid	46.78	47.62
TraesCS1D01G203500.2	Wheat	plastid	46.78	47.06
TraesCS1A01G200000.2	Wheat	plastid	46.2	46.47
Os10t0536500-01	Rice	plasma membrane	45.03	44.77
KXG39014	Sorghum	plastid	45.03	44.25
HORVU1Hr1G051700.6	Barley	plastid	44.44	43.18
VIT_09s0002g04360.t01	Wine grape	plastid	33.33	39.04
Zm00001d029745_P004	Maize	plastid	42.11	37.89
TraesCS2A01G235000.2	Wheat	mitochondrion, plastid	35.09	36.14
TraesCS2B01G256300.2	Wheat	mitochondrion, plastid	36.26	36.05
VIT_16s0050g02240.t01	Wine grape	plastid	29.24	31.06
VIT_15s0046g01470.t01	Wine grape	plastid	26.9	27.71
VIT_00s0199g00110.t01	Wine grape	plastid	26.32	22.06
VIT_00s0199g00150.t01	Wine grape	plastid	26.32	22.06

Protein Annotations

EntrezGene:100248815	wikigene:100248815	MapMan:35.1	EMBL:AM487016	InterPro:CAAD_dom	ProteinID:CAN75451
ProteinID:CAN75451.1	ProteinID:CBI38720	ProteinID:CBI38720.3	InterPro:CURT1	UniProt:D7U838	EMBL:FN596739
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0009579	GO:GO:0016020	GO:GO:0016021
EntrezGene:LOC100248815	wikigene:LOC100248815	PFAM:PF14159	PANTHER:PTHR33222	PANTHER:PTHR33222:SF9	TIGR:TC70882
TMHMM:TMhelix	UniParc:UPI00015CA8FD	ArrayExpress:VIT_15s0048g02500	EnsemblPlantsGene:VIT_15s0048g02500	EnsemblPlants:VIT_15s0048g02500.t01	unigene:Vvi.3638
RefSeq:XP_002266107	RefSeq:XP_002266107.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr15:-:16666862..16668469

Molecular Weight (calculated)

18105.9 Da

IEP (calculated)

8.672

GRAVY (calculated)

0.032

Length

171 amino acids

Sequence
(BLAST)

001: MASTTTPLSI SSSSTLIDGK APRQSAAASS QCVTLPTLPP PPVPSQHRPG KGTTYCRKIA RNVIAMATGE APAEVGTTEV PEIIKTVQEA WDKVEDKYAV
101: SSLAAAGFVG LWVSTGMVSA IDKLPLVPGV LEIVGIGYSG WFAYKNLIFK PDREALIQKI KDTYKEIIGS S

Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)

001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Arabidopsis Description

CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.