Factsheet for PGSC0003DMT400029398

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g005050.2.1	Tomato	plastid	97.22	97.22
VIT_15s0048g02500.t01	Wine grape	plastid	68.33	71.93
KRH47772	Soybean	plastid	62.22	66.67
KRH06344	Soybean	plastid	61.11	65.48
CDY27519	Canola	mitochondrion	45.0	63.28
AT2G46820.1	Thale cress	plastid	59.44	61.49
CDX80050	Canola	plastid	61.67	60.66
Bra040482.1-P	Field mustard	plastid	56.11	60.48
CDY48012	Canola	plastid	56.11	60.48
Bra004504.1-P	Field mustard	plastid	61.11	60.11
CDY41562	Canola	plastid	61.11	60.11
CDY27520	Canola	plastid	49.44	56.69
GSMUA_Achr8P12340_001	Banana	plastid	55.0	56.57
GSMUA_AchrUn_...	Banana	plastid	48.33	51.79
EER97176	Sorghum	mitochondrion, plastid	42.22	51.7
KRH68969	Soybean	cytosol	63.33	50.67
Os07t0469100-01	Rice	plastid	42.22	50.67
Zm00001d021370_P001	Maize	plastid	43.33	50.65
TraesCS2D01G238700.1	Wheat	plastid	37.78	46.9
KRG97255	Soybean	plastid	52.22	46.77
TraesCS1B01G214700.1	Wheat	plastid	42.22	45.24
Os10t0536500-01	Rice	plasma membrane	42.78	44.77
TraesCS1D01G203500.2	Wheat	plastid	42.22	44.71
TraesCS1A01G200000.2	Wheat	plastid	42.22	44.71
KXG39014	Sorghum	plastid	42.78	44.25
HORVU1Hr1G051700.6	Barley	plastid	41.67	42.61
Zm00001d029745_P004	Maize	plastid	40.56	38.42
TraesCS2B01G256300.2	Wheat	mitochondrion, plastid	33.89	35.47
TraesCS2A01G235000.2	Wheat	mitochondrion, plastid	31.67	34.34
PGSC0003DMT400000589	Potato	plastid	30.56	32.93
PGSC0003DMT400016846	Potato	plastid	26.11	25.97
PGSC0003DMT400041783	Potato	plastid	23.33	5.48

Protein Annotations

EntrezGene:102602283	MapMan:35.1	InterPro:CAAD_dom	InterPro:CURT1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009295	GO:GO:0009507	GO:GO:0009508	GO:GO:0009534
GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009719	GO:GO:0009737	GO:GO:0009773
GO:GO:0009941	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0019904
GO:GO:0030093	UniProt:M1ASR5	PFAM:PF14159	EnsemblPlantsGene:PGSC0003DMG400011295	PGSC:PGSC0003DMG400011295	EnsemblPlants:PGSC0003DMT400029398
PANTHER:PTHR33222	PANTHER:PTHR33222:SF9	TMHMM:TMhelix	UniParc:UPI00029501F4	RefSeq:XP_006352625.1	SEG:seg

Description

Thylakoid membrane phosphoprotein 14 kDa, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400011295]

Coordinates

chr10:+:134766..136876

Molecular Weight (calculated)

19037.9 Da

IEP (calculated)

8.177

GRAVY (calculated)

0.156

Length

180 amino acids

Sequence
(BLAST)

001: MASTTSPSLS LSSSSTLVDG KTTRQSAAVA SSQCVTLPTL PPPPAVQSRA ARTTAYCRKI ARNVAAMATS TGEVATAEAT GETATTELPS ELVQKIQEVW
101: DKVDDKYAVS SLGVAAFILL WSSTGVISAI DRLPLIPGVL ELVGIGYTGW FAYKNLIFKP DREALIVKIK ELYKDILGSS

Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)

001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Arabidopsis Description

CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.