CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06344	Soybean	plastid	94.05	94.05
VIT_15s0048g02500.t01	Wine grape	plastid	70.83	69.59
AT2G46820.1	Thale cress	plastid	66.07	63.79
CDY27519	Canola	mitochondrion	47.62	62.5
PGSC0003DMT400029398	Potato	plastid	66.67	62.22
Solyc10g005050.2.1	Tomato	plastid	65.48	61.11
Bra040482.1-P	Field mustard	plastid	60.71	61.08
CDY48012	Canola	plastid	60.71	61.08
CDY41562	Canola	plastid	66.07	60.66
CDX80050	Canola	plastid	64.88	59.56
Bra004504.1-P	Field mustard	plastid	64.29	59.02
CDY27520	Canola	plastid	52.98	56.69
GSMUA_Achr8P12340_001	Banana	plastid	57.74	55.43
GSMUA_AchrUn_...	Banana	plastid	53.57	53.57
KRH68969	Soybean	cytosol	70.83	52.89
KRG97255	Soybean	plastid	59.52	49.75
EER97176	Sorghum	mitochondrion, plastid	42.26	48.3
Os07t0469100-01	Rice	plastid	42.86	48.0
Zm00001d021370_P001	Maize	plastid	43.45	47.4
TraesCS2D01G238700.1	Wheat	plastid	39.29	45.52
TraesCS1B01G214700.1	Wheat	plastid	42.26	42.26
TraesCS1D01G203500.2	Wheat	plastid	42.26	41.76
KXG39014	Sorghum	plastid	42.86	41.38
TraesCS1A01G200000.2	Wheat	plastid	41.67	41.18
Os10t0536500-01	Rice	plasma membrane	41.07	40.12
HORVU1Hr1G051700.6	Barley	plastid	41.07	39.2
KRH47274	Soybean	plastid	30.36	35.17
TraesCS2B01G256300.2	Wheat	mitochondrion, plastid	35.71	34.88
Zm00001d029745_P004	Maize	plastid	39.29	34.74
TraesCS2A01G235000.2	Wheat	mitochondrion, plastid	33.33	33.73
KRH47985	Soybean	plastid	27.38	28.22
KRH06541	Soybean	plastid	27.38	28.22
KRH44347	Soybean	plastid	23.81	23.67
KRH74509	Soybean	plastid	25.0	21.32
KRH69655	Soybean	endoplasmic reticulum	23.81	20.0

Protein Annotations

EntrezGene:100306403	MapMan:35.1	EMBL:ACUP02004163	InterPro:CAAD_dom	InterPro:CURT1	EnsemblPlantsGene:GLYMA_07G049000
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0009579	GO:GO:0016020	GO:GO:0016021
UniProt:I1KHN6	EnsemblPlants:KRH47772	ProteinID:KRH47772	ProteinID:KRH47772.1	PFAM:PF14159	PANTHER:PTHR33222
PANTHER:PTHR33222:SF9	TMHMM:TMhelix	UniParc:UPI00023C7EE7	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:-:4162544..4164995

Molecular Weight (calculated)

18099.9 Da

IEP (calculated)

9.089

GRAVY (calculated)

0.008

Length

168 amino acids

Sequence
(BLAST)

001: MASTSSALTI SSSSTLLDGK APRQSPAASP QCVSLPPPPL HSQNRSWKTT AYCRKVARKV MAMATGEAPA EATPTEVPEI VKTLQETWDK VDDKYAVSSL
101: ALVGVIALWG SVGLISAIDR LPLIPGILEI VGIGYTGWFV YKNIVFKPDR EALVRKVKET YNEILGSN

Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)

001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Arabidopsis Description

CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.