CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47772	Soybean	plastid	94.05	94.05
VIT_15s0048g02500.t01	Wine grape	plastid	70.24	69.01
AT2G46820.1	Thale cress	plastid	66.07	63.79
CDY27519	Canola	mitochondrion	48.21	63.28
CDY41562	Canola	plastid	66.67	61.2
PGSC0003DMT400029398	Potato	plastid	65.48	61.11
Bra040482.1-P	Field mustard	plastid	60.71	61.08
CDY48012	Canola	plastid	60.71	61.08
CDX80050	Canola	plastid	65.48	60.11
Solyc10g005050.2.1	Tomato	plastid	64.29	60.0
Bra004504.1-P	Field mustard	plastid	64.88	59.56
CDY27520	Canola	plastid	53.57	57.32
KRH68969	Soybean	cytosol	71.43	53.33
GSMUA_Achr8P12340_001	Banana	plastid	55.36	53.14
GSMUA_AchrUn_...	Banana	plastid	52.98	52.98
KRG97255	Soybean	plastid	61.31	51.24
EER97176	Sorghum	mitochondrion, plastid	42.86	48.98
Zm00001d021370_P001	Maize	plastid	44.05	48.05
Os07t0469100-01	Rice	plastid	42.86	48.0
TraesCS2D01G238700.1	Wheat	plastid	39.29	45.52
TraesCS1B01G214700.1	Wheat	plastid	41.67	41.67
KXG39014	Sorghum	plastid	42.86	41.38
TraesCS1D01G203500.2	Wheat	plastid	41.67	41.18
TraesCS1A01G200000.2	Wheat	plastid	41.07	40.59
Os10t0536500-01	Rice	plasma membrane	41.07	40.12
HORVU1Hr1G051700.6	Barley	plastid	40.48	38.64
KRH47274	Soybean	plastid	30.36	35.17
TraesCS2B01G256300.2	Wheat	mitochondrion, plastid	35.71	34.88
Zm00001d029745_P004	Maize	plastid	38.69	34.21
TraesCS2A01G235000.2	Wheat	mitochondrion, plastid	33.33	33.73
KRH47985	Soybean	plastid	27.38	28.22
KRH06541	Soybean	plastid	27.38	28.22
KRH44347	Soybean	plastid	23.81	23.67
KRH74509	Soybean	plastid	25.0	21.32
KRH69655	Soybean	endoplasmic reticulum	23.81	20.0

Protein Annotations

EMBL:ACUP02009827	EnsemblPlants:KRH06344	EnsemblPlantsGene:GLYMA_16G017600	EntrezGene:100790668	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1
PANTHER:PTHR33222	PANTHER:PTHR33222:SF9	PFAM:PF14159	ProteinID:KRH06344	ProteinID:KRH06344.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000233C023	UniProt:I1MKB4	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr16:-:1564173..1566310

Molecular Weight (calculated)

18037.7 Da

IEP (calculated)

7.288

GRAVY (calculated)

0.098

Length

168 amino acids

Sequence
(BLAST)

001: MASTSSALTI SSSSTLHDCK APRQSPAASP QCVSLPSPLL HSQNCSWKTT AYCRSIARNV MAMATGEAPA EAAPTEVPEI VKTLQETWDK VDDKYAVSSL
101: ALVGVVALWG SVGLISAIDR LPLIPGILEI VGIGYTGWFV YKNIVFKPDR EALVRKVKET YNEILGSN

Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)

001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Arabidopsis Description

CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.