Factsheet for GSMUA_AchrUn_randomP04630_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
extracellular 1
nucleus 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0048g02500.t01	Wine grape	plastid	55.95	54.97
KRH47772	Soybean	plastid	53.57	53.57
KRH06344	Soybean	plastid	52.98	52.98
GSMUA_Achr8P12340_001	Banana	plastid	54.17	52.0
CDY27519	Canola	mitochondrion	38.69	50.78
AT2G46820.1	Thale cress	plastid	52.38	50.57
Solyc10g005050.2.1	Tomato	plastid	52.98	49.44
TraesCS2D01G238700.1	Wheat	plastid	42.26	48.97
PGSC0003DMT400029398	Potato	plastid	51.79	48.33
Os07t0469100-01	Rice	plastid	42.86	48.0
CDX80050	Canola	plastid	51.79	47.54
Bra004504.1-P	Field mustard	plastid	51.79	47.54
CDY41562	Canola	plastid	51.79	47.54
EER97176	Sorghum	mitochondrion, plastid	41.07	46.94
CDY48012	Canola	plastid	45.83	46.11
Bra040482.1-P	Field mustard	plastid	45.83	46.11
Zm00001d021370_P001	Maize	plastid	42.26	46.1
CDY27520	Canola	plastid	40.48	43.31
TraesCS1B01G214700.1	Wheat	plastid	39.88	39.88
KXG39014	Sorghum	plastid	41.07	39.66
TraesCS1D01G203500.2	Wheat	plastid	39.88	39.41
Os10t0536500-01	Rice	plasma membrane	39.88	38.95
TraesCS1A01G200000.2	Wheat	plastid	39.29	38.82
KRH68969	Soybean	cytosol	50.6	37.78
HORVU1Hr1G051700.6	Barley	plastid	38.69	36.93
TraesCS2A01G235000.2	Wheat	mitochondrion, plastid	34.52	34.94
TraesCS2B01G256300.2	Wheat	mitochondrion, plastid	35.71	34.88
KRG97255	Soybean	plastid	41.67	34.83
Zm00001d029745_P004	Maize	plastid	38.69	34.21
GSMUA_Achr6P26770_001	Banana	plastid	26.79	31.03
GSMUA_Achr5P17930_001	Banana	cytosol	17.26	25.66
GSMUA_Achr6P04200_001	Banana	cytosol	20.83	25.55
GSMUA_Achr10P...	Banana	plastid	26.19	25.29
GSMUA_Achr3P20270_001	Banana	plastid	24.4	24.26
GSMUA_Achr7P18720_001	Banana	plastid	25.0	18.03
GSMUA_Achr7P12860_001	Banana	plastid	18.45	13.03

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP04630_001	EnsemblPlants:GSMUA_AchrUn_randomT04630_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG04630_001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222
PANTHER:PTHR33222:SF9	PFAM:PF14159	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002958F9B	UniProt:M0U6C5
MapMan:35.1	:	:	:	:	:

Description

Thylakoid membrane phosphoprotein 14 kDa, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04630_001]

Coordinates

chrchrUn_random:+:18434525..18436203

Molecular Weight (calculated)

18291.2 Da

IEP (calculated)

8.451

GRAVY (calculated)

0.089

Length

168 amino acids

Sequence
(BLAST)

001: MATTTTTSAT CGLTSRALLD PKAASSQLRP HFVRLPTLPP PRPTASWSHR KTASHMSRSV IAMATGETPA EVSSELPEVM KTIKDAWDKL DDKYAVASLV
101: LVGLVALWTT TGMISAIDRL PIVPGVLELV GIGYTVWFVY YNLVFEPDRE ALIEKIKGTY SDIIGSRS

Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)

001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Arabidopsis Description

CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.