CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040482.1-P	Field mustard	plastid	94.53	72.46
CDY48012	Canola	plastid	94.53	72.46
CDY27520	Canola	plastid	78.91	64.33
AT2G46820.1	Thale cress	plastid	78.12	57.47
CDX80050	Canola	plastid	71.88	50.27
CDY41562	Canola	plastid	71.09	49.73
KRH06344	Soybean	plastid	63.28	48.21
KRH47772	Soybean	plastid	62.5	47.62
VIT_15s0048g02500.t01	Wine grape	plastid	62.5	46.78
Os07t0469100-01	Rice	plastid	54.69	46.67
EER97176	Sorghum	mitochondrion, plastid	53.12	46.26
Solyc10g005050.2.1	Tomato	plastid	64.06	45.56
PGSC0003DMT400029398	Potato	plastid	63.28	45.0
Zm00001d021370_P001	Maize	plastid	53.12	44.16
TraesCS2D01G238700.1	Wheat	plastid	49.22	43.45
GSMUA_Achr8P12340_001	Banana	plastid	53.91	39.43
GSMUA_AchrUn_...	Banana	plastid	50.78	38.69
KRH68969	Soybean	cytosol	63.28	36.0
TraesCS1B01G214700.1	Wheat	plastid	46.88	35.71
TraesCS1D01G203500.2	Wheat	plastid	46.88	35.29
TraesCS1A01G200000.2	Wheat	plastid	46.88	35.29
HORVU1Hr1G051700.6	Barley	plastid	47.66	34.66
KXG39014	Sorghum	plastid	46.88	34.48
Os10t0536500-01	Rice	plasma membrane	45.31	33.72
KRG97255	Soybean	plastid	52.34	33.33
TraesCS2B01G256300.2	Wheat	mitochondrion, plastid	43.75	32.56
TraesCS2A01G235000.2	Wheat	mitochondrion, plastid	40.62	31.33
CDY67261	Canola	plastid	35.16	31.03
CDY52984	Canola	plastid	35.16	31.03
Zm00001d029745_P004	Maize	plastid	42.19	28.42
CDY48508	Canola	plastid	27.34	21.6
CDY07178	Canola	plastid	28.12	21.43
CDX74360	Canola	plasma membrane, plastid	27.34	21.34
CDX91881	Canola	plastid	26.56	20.73
CDY53863	Canola	plastid	27.34	20.71
CDY01956	Canola	plastid	26.56	20.12
CDX90383	Canola	plastid	26.56	17.35
CDY52513	Canola	plastid	25.78	16.26

Protein Annotations

EnsemblPlants:CDY27519	EnsemblPlantsGene:GSBRNA2T00038194001	GO:A0A078GQS2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222
PANTHER:PTHR33222:SF9	PFAM:PF14159	ProteinID:CDY27519	ProteinID:CDY27519.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EDC87A	UniProt:A0A078GQS2	MapMan:35.1	:	:	:

Description

BnaC04g51600DBnaC04g51600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQS2]

Coordinates

chrLK032205:-:482226..483497

Molecular Weight (calculated)

14279.3 Da

IEP (calculated)

5.232

GRAVY (calculated)

0.176

Length

128 amino acids

Sequence
(BLAST)

001: MAFCLFIGRK IARRNVLTRA TEVEAPVTAE AETTELPEIV KTAQEAWEKV EDKYAIGSLA FAALLALWGS TGLISAIDRL PLFPGVFELV GIGYTGWFVY
101: KNMIFKPDRE VLFQKVKDTY RDILGSSS

Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)

001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Arabidopsis Description

CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.