CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48508	Canola	plastid	94.05	97.53
CDY53863	Canola	plastid	91.67	91.12
CDY01956	Canola	plastid	91.07	90.53
CDX74360	Canola	plasma membrane, plastid	88.1	90.24
CDX91881	Canola	plastid	88.1	90.24
AT4G01150.1	Thale cress	plastid	83.93	85.98
Os02t0731600-01	Rice	cytosol	45.83	71.3
KRH47985	Soybean	plastid	63.1	65.03
KRH06541	Soybean	plastid	61.9	63.8
VIT_16s0050g02240.t01	Wine grape	plastid	60.71	63.35
PGSC0003DMT400000589	Potato	plastid	61.9	62.28
Solyc10g011770.2.1	Tomato	plastid	60.71	60.35
VIT_15s0046g01470.t01	Wine grape	plastid	59.52	60.24
Solyc01g095430.2.1	Tomato	plastid	60.12	59.41
EER89571	Sorghum	plastid	50.6	57.43
Zm00001d037323_P001	Maize	plastid	50.0	56.76
Zm00001d051785_P001	Maize	plastid	52.38	56.05
TraesCS6A01G292800.2	Wheat	plastid	51.19	54.78
Zm00001d027456_P001	Maize	plastid	48.81	54.67
TraesCS6B01G323200.2	Wheat	plastid	50.6	54.14
GSMUA_Achr3P20270_001	Banana	plastid	53.57	53.25
TraesCS6D01G273900.1	Wheat	plastid	50.6	53.12
GSMUA_Achr10P...	Banana	plastid	54.76	52.87
Os06t0264800-01	Rice	plastid	47.62	51.28
TraesCS7A01G206700.1	Wheat	plastid	48.21	51.27
TraesCS7D01G209600.1	Wheat	plastid	47.62	50.63
TraesCS7B01G114100.1	Wheat	plastid	47.62	50.63
KXG30819	Sorghum	plastid	51.79	50.0
GSMUA_Achr7P18720_001	Banana	plastid	55.36	39.91
HORVU6Hr1G073100.4	Barley	plastid	52.98	31.67
CDY27520	Canola	plastid	27.98	29.94
CDY52984	Canola	plastid	25.6	29.66
CDY67261	Canola	plastid	25.0	28.97
CDY48012	Canola	plastid	28.57	28.74
CDX90383	Canola	plastid	33.33	28.57
CDY27519	Canola	mitochondrion	21.43	28.12
CDY52513	Canola	plastid	32.14	26.6
CDY41562	Canola	plastid	28.57	26.23
CDX80050	Canola	plastid	28.57	26.23

Protein Annotations

EnsemblPlants:CDY07178	EnsemblPlantsGene:GSBRNA2T00123537001	GO:A0A078F690	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	InterPro:CAAD_dom	InterPro:CURT1	ncoils:Coil	PANTHER:PTHR33222	PANTHER:PTHR33222:SF4
PFAM:PF14159	ProteinID:CDY07178	ProteinID:CDY07178.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EF4681
MapMan:35.1	:	:	:	:	:

Description

BnaCnng01930D

Coordinates

chrLK031975:+:709681..711110

Molecular Weight (calculated)

18208.2 Da

IEP (calculated)

9.385

GRAVY (calculated)

0.137

Length

168 amino acids

Sequence
(BLAST)

001: MAMTVAASSS VAVMIPRVSS TQCSTVPYLL PPLPPRSFGR SSFTVPLKLV SGNGLQKVEL MKTRASSSDE TSTSIDTNEL FNDLKEKWDG LENKTTVVIY
101: GGGAIVAVWL SSILVGAINS VPLLPKVMEL VGLGYTGWFV YRYLLFKSSR KELAEDIDSL KKKIAGTE

Best Arabidopsis Sequence Match ( AT4G38100.1 )
(BLAST)

001: MELCTRSTTI ITHLPASFNG HGYLAGKSVD RISLPLQRNV ASLVLQSRTL RCSRKFPGET VTEETSTGVN EFGVEDRDGV VVAAEEKNSN SEAPQAEDEE
101: TQALEFLNDI KLDSDKTYSI LLYGSGAIVA LYLTSAIVSS LEAIPLFPKL MEVVGLGYTL WFTTRYLLFK RNREELKTKV SEIKKQVLGS DSE

Arabidopsis Description

CURT1DProtein CURVATURE THYLAKOID 1D, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDD3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.