Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_02s0025g00640.t01 | |
| VIT_07s0031g02730.t01 | |
| VIT_15s0046g01760.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G01150.1 | VIT_02s0025g00640.t01 | AT5G41600.1 | 21798944 |
| AT4G01150.1 | VIT_07s0031g02730.t01 | AT5G41600.1 | 21798944 |
| AT4G01150.1 | VIT_15s0046g01760.t01 | AT5G41600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400000589 | Potato | plastid | 69.28 | 68.86 |
| VIT_16s0050g02240.t01 | Wine grape | plastid | 66.27 | 68.32 |
| Os02t0731600-01 | Rice | cytosol | 43.98 | 67.59 |
| KRH47985 | Soybean | plastid | 66.27 | 67.48 |
| KRH06541 | Soybean | plastid | 65.06 | 66.26 |
| Solyc01g095430.2.1 | Tomato | plastid | 66.27 | 64.71 |
| AT4G01150.1 | Thale cress | plastid | 63.86 | 64.63 |
| CDX74360 | Canola | plasma membrane, plastid | 60.84 | 61.59 |
| CDX91881 | Canola | plastid | 60.84 | 61.59 |
| Bra008533.1-P | Field mustard | plastid | 62.05 | 60.95 |
| CDY53863 | Canola | plastid | 62.05 | 60.95 |
| Bra000947.1-P | Field mustard | plastid | 59.64 | 60.37 |
| CDY01956 | Canola | plastid | 60.84 | 59.76 |
| CDY07178 | Canola | plastid | 60.24 | 59.52 |
| EER89571 | Sorghum | plastid | 53.01 | 59.46 |
| CDY48508 | Canola | plastid | 57.83 | 59.26 |
| Bra037380.1-P | Field mustard | plastid | 57.83 | 59.26 |
| Zm00001d037323_P001 | Maize | plastid | 52.41 | 58.78 |
| Zm00001d051785_P001 | Maize | plastid | 55.42 | 58.6 |
| GSMUA_Achr3P20270_001 | Banana | plastid | 59.64 | 58.58 |
| GSMUA_Achr10P... | Banana | plastid | 60.24 | 57.47 |
| TraesCS6B01G323200.2 | Wheat | plastid | 52.41 | 55.41 |
| Zm00001d027456_P001 | Maize | plastid | 50.0 | 55.33 |
| TraesCS6A01G292800.2 | Wheat | plastid | 51.81 | 54.78 |
| TraesCS6D01G273900.1 | Wheat | plastid | 52.41 | 54.38 |
| Os06t0264800-01 | Rice | plastid | 50.0 | 53.21 |
| TraesCS7A01G206700.1 | Wheat | plastid | 50.0 | 52.53 |
| TraesCS7D01G209600.1 | Wheat | plastid | 50.0 | 52.53 |
| KXG30819 | Sorghum | plastid | 54.82 | 52.3 |
| TraesCS7B01G114100.1 | Wheat | plastid | 49.4 | 51.9 |
| GSMUA_Achr7P18720_001 | Banana | plastid | 62.05 | 44.21 |
| HORVU6Hr1G073100.4 | Barley | plastid | 53.61 | 31.67 |
| VIT_09s0002g04360.t01 | Wine grape | plastid | 27.71 | 31.51 |
| VIT_00s0199g00110.t01 | Wine grape | plastid | 35.54 | 28.92 |
| VIT_00s0199g00150.t01 | Wine grape | plastid | 35.54 | 28.92 |
| VIT_15s0048g02500.t01 | Wine grape | plastid | 27.71 | 26.9 |
Protein Annotations
| EntrezGene:100253425 | wikigene:100253425 | MapMan:35.1 | InterPro:CAAD_dom | ProteinID:CCB62492 | ProteinID:CCB62492.1 |
| InterPro:CURT1 | UniProt:F6I696 | EMBL:FN596755 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0009579 | GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100253425 | wikigene:LOC100253425 | PFAM:PF14159 |
| PANTHER:PTHR33222 | PANTHER:PTHR33222:SF4 | TIGR:TC53677 | TMHMM:TMhelix | UniParc:UPI00015CB115 | ArrayExpress:VIT_15s0046g01470 |
| EnsemblPlantsGene:VIT_15s0046g01470 | EnsemblPlants:VIT_15s0046g01470.t01 | unigene:Vvi.6792 | RefSeq:XP_002280114 | RefSeq:XP_002280114.1 | SEG:seg |
Description
No Description!
Coordinates
chr15:+:18437153..18440046
Molecular Weight (calculated)
17882.6 Da
IEP (calculated)
9.852
GRAVY (calculated)
0.174
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMPYVAVAS SSMAATPVLM PRLPATAAAN AATRCSALPY LPPRLSSSSN HFSGSRRFSS LQVRASSSEE TSLNTEELFT DLKAKWDALE NKSTVFLYGG
101: GAIVAVWLSS VVVGAVNSVP LLPKIMELVG LGYTAWFVYR YILFKSNRKE LATDIEALKK KVTGAE
101: GAIVAVWLSS VVVGAVNSVP LLPKIMELVG LGYTAWFVYR YILFKSNRKE LATDIEALKK KVTGAE
001: MAISVAASSS MAVMVPRVPA VSTRCSAVPY LPPRSFGRSS FTVPLKLVSG NGLQKVELLK TRASSEETSS IDTNELITDL KEKWDGLENK STVLIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE
Arabidopsis Description
CURT1AProtein CURVATURE THYLAKOID 1A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04616]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.