Factsheet for VIT_00s0199g00110.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0199g00150.t01	Wine grape	plastid	99.51	99.51
GSMUA_Achr5P17930_001	Banana	cytosol	26.47	47.79
KRH69655	Soybean	endoplasmic reticulum	43.63	44.5
KRH74509	Soybean	plastid	42.65	44.16
AT4G38100.1	Thale cress	plastid	40.2	42.49
Bra010636.1-P	Field mustard	plastid	39.22	41.88
GSMUA_Achr6P04200_001	Banana	cytosol	27.45	40.88
CDX90383	Canola	plastid	39.22	40.82
CDY52513	Canola	plastid	39.71	39.9
VIT_15s0046g01470.t01	Wine grape	plastid	28.92	35.54
VIT_16s0050g02240.t01	Wine grape	plastid	27.94	35.4
Os09t0465800-01	Rice	plastid	28.43	32.04
Zm00001d005926_P001	Maize	plastid	27.94	31.49
GSMUA_Achr7P12860_001	Banana	plastid	34.8	29.83
TraesCS5A01G247100.1	Wheat	plastid	25.98	28.96
TraesCS5B01G244200.1	Wheat	mitochondrion, plastid	25.98	28.96
TraesCS5D01G253600.1	Wheat	plastid	25.98	28.96
EER99031	Sorghum	mitochondrion, plastid	26.96	28.8
VIT_15s0048g02500.t01	Wine grape	plastid	22.06	26.32
VIT_09s0002g04360.t01	Wine grape	plastid	18.14	25.34
HORVU0Hr1G013240.2	Barley	cytosol	24.51	23.7
Solyc11g010480.1.1	Tomato	plastid	46.08	18.08
PGSC0003DMT400041783	Potato	plastid	44.61	11.88

Protein Annotations

EntrezGene:100261101	wikigene:100261101	MapMan:35.1	InterPro:CAAD_dom	ProteinID:CBI18704	ProteinID:CBI18704.3
InterPro:CURT1	ncoils:Coil	UniProt:D7SSS0	EMBL:FN594987	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100261101	wikigene:LOC100261101
PFAM:PF14159	PANTHER:PTHR33222	PANTHER:PTHR33222:SF2	TMHMM:TMhelix	UniParc:UPI00015CD89F	ArrayExpress:VIT_00s0199g00110
EnsemblPlantsGene:VIT_00s0199g00110	EnsemblPlants:VIT_00s0199g00110.t01	RefSeq:XP_002274430	RefSeq:XP_002274430.1	:	:

Description

No Description!

Coordinates

chrUn:-:11166333..11170851

Molecular Weight (calculated)

22995.1 Da

IEP (calculated)

4.223

GRAVY (calculated)

-0.157

Length

204 amino acids

Sequence
(BLAST)

001: MELCTTRAFS NLHHRTLFNP LANRLRWKTI SIPFKQSPIS RTSPGSLYFN NPLLRASISE GSSSGADQYI GEERDSVLVM EDIPATEENV YNEVIPTEAP
101: IEDSQVEEQT VAFEFLDNLN IKFDSEDPYS IFLYGTGALT ALWFASAIVG AIDSIPIFPK LMEIVGLGYT LWFSARYLIF KQNRDELAAK IEELKQQVLG
201: SEDE

Best Arabidopsis Sequence Match ( AT4G38100.1 )
(BLAST)

001: MELCTRSTTI ITHLPASFNG HGYLAGKSVD RISLPLQRNV ASLVLQSRTL RCSRKFPGET VTEETSTGVN EFGVEDRDGV VVAAEEKNSN SEAPQAEDEE
101: TQALEFLNDI KLDSDKTYSI LLYGSGAIVA LYLTSAIVSS LEAIPLFPKL MEVVGLGYTL WFTTRYLLFK RNREELKTKV SEIKKQVLGS DSE

Arabidopsis Description

CURT1DProtein CURVATURE THYLAKOID 1D, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDD3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.