Factsheet for Bra010636.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90383	Canola	plastid	96.86	94.39
CDY52513	Canola	plastid	94.76	89.16
AT4G38100.1	Thale cress	plastid	73.82	73.06
GSMUA_Achr5P17930_001	Banana	cytosol	23.56	39.82
VIT_00s0199g00150.t01	Wine grape	plastid	41.88	39.22
VIT_00s0199g00110.t01	Wine grape	plastid	41.88	39.22
KRH74509	Soybean	plastid	38.22	37.06
KRH69655	Soybean	endoplasmic reticulum	38.74	37.0
TraesCS5D01G253600.1	Wheat	plastid	33.51	34.97
TraesCS5A01G247100.1	Wheat	plastid	33.51	34.97
TraesCS5B01G244200.1	Wheat	mitochondrion, plastid	32.98	34.43
Zm00001d005926_P001	Maize	plastid	31.94	33.7
EER99031	Sorghum	mitochondrion, plastid	33.51	33.51
Os09t0465800-01	Rice	plastid	31.41	33.15
Bra037380.1-P	Field mustard	plastid	27.75	32.72
Bra000947.1-P	Field mustard	plastid	27.75	32.32
Bra008533.1-P	Field mustard	plastid	27.75	31.36
GSMUA_Achr6P04200_001	Banana	cytosol	20.42	28.47
HORVU0Hr1G013240.2	Barley	cytosol	27.75	25.12
GSMUA_Achr7P12860_001	Banana	plastid	29.32	23.53
Bra040482.1-P	Field mustard	plastid	20.42	23.35
Bra018954.1-P	Field mustard	plastid	15.71	20.69
Bra004504.1-P	Field mustard	plastid	17.8	18.58
Solyc11g010480.1.1	Tomato	plastid	37.7	13.85
PGSC0003DMT400041783	Potato	plastid	37.17	9.27

Protein Annotations

EnsemblPlants:Bra010636.1	EnsemblPlants:Bra010636.1-P	EnsemblPlantsGene:Bra010636	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	GO:GO:0016021
InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222	PANTHER:PTHR33222:SF2	PFAM:PF14159	SEG:seg
TMHMM:TMhelix	UniParc:UPI00025465A4	UniProt:M4D2D6	MapMan:35.1	:	:

Description

AT4G38100 (E=3e-064) | unknown protein

Coordinates

chrA08:-:15712595..15713671

Molecular Weight (calculated)

21045.0 Da

IEP (calculated)

4.733

GRAVY (calculated)

-0.188

Length

191 amino acids

Sequence
(BLAST)

001: MELSTVTTIT HLPPTTSRHV YLTGNTSPVS RISLPPQGNV PSLRLQSHTL RCARKFPGET VSEDTSTGVN EFVLEKPGVV ADKEDNFTSE AQAEDEQTQA
101: SLEFLNDIKL DSDNTYSIVL YGFGGILAIY LTSAIVGSLE SVPLLPKLME VVGLGYTLWF TTRYLLFKSN REELKTKISE IKKQVLGSDS D

Best Arabidopsis Sequence Match ( AT4G38100.1 )
(BLAST)

001: MELCTRSTTI ITHLPASFNG HGYLAGKSVD RISLPLQRNV ASLVLQSRTL RCSRKFPGET VTEETSTGVN EFGVEDRDGV VVAAEEKNSN SEAPQAEDEE
101: TQALEFLNDI KLDSDKTYSI LLYGSGAIVA LYLTSAIVSS LEAIPLFPKL MEVVGLGYTL WFTTRYLLFK RNREELKTKV SEIKKQVLGS DSE

Arabidopsis Description

CURT1DProtein CURVATURE THYLAKOID 1D, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDD3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.