Factsheet for Bra004504.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80050	Canola	plastid	99.45	99.45
AT2G46820.1	Thale cress	plastid	75.41	79.31
Bra040482.1-P	Field mustard	plastid	68.85	75.45
VIT_15s0048g02500.t01	Wine grape	plastid	64.48	69.01
KRH06344	Soybean	plastid	59.56	64.88
KRH47772	Soybean	plastid	59.02	64.29
Solyc10g005050.2.1	Tomato	plastid	60.11	61.11
PGSC0003DMT400029398	Potato	plastid	60.11	61.11
GSMUA_Achr8P12340_001	Banana	plastid	49.73	52.0
GSMUA_AchrUn_...	Banana	plastid	47.54	51.79
TraesCS2D01G238700.1	Wheat	plastid	39.89	50.34
EER97176	Sorghum	mitochondrion, plastid	40.44	50.34
Zm00001d021370_P001	Maize	plastid	41.53	49.35
KRH68969	Soybean	cytosol	60.11	48.89
Os07t0469100-01	Rice	plastid	39.34	48.0
KRG97255	Soybean	plastid	50.82	46.27
TraesCS1D01G203500.2	Wheat	plastid	42.08	45.29
TraesCS1B01G214700.1	Wheat	plastid	41.53	45.24
TraesCS1A01G200000.2	Wheat	plastid	41.53	44.71
HORVU1Hr1G051700.6	Barley	plastid	40.44	42.05
KXG39014	Sorghum	plastid	38.8	40.8
Os10t0536500-01	Rice	plasma membrane	37.7	40.12
TraesCS2B01G256300.2	Wheat	mitochondrion, plastid	35.52	37.79
Zm00001d029745_P004	Maize	plastid	38.25	36.84
TraesCS2A01G235000.2	Wheat	mitochondrion, plastid	32.79	36.14
Bra018954.1-P	Field mustard	plastid	28.42	35.86
Bra000947.1-P	Field mustard	plastid	25.14	28.05
Bra008533.1-P	Field mustard	plastid	25.68	27.81
Bra037380.1-P	Field mustard	plastid	24.59	27.78
Bra010636.1-P	Field mustard	plastid	18.58	17.8

Protein Annotations

EnsemblPlants:Bra004504.1	EnsemblPlants:Bra004504.1-P	EnsemblPlantsGene:Bra004504	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222
PANTHER:PTHR33222:SF9	PFAM:PF14159	SEG:seg	TMHMM:TMhelix	UniParc:UPI00025472D6	UniProt:M4CJX0
MapMan:35.1	:	:	:	:	:

Description

AT2G46820 (E=6e-050) PTAC8, TMP14, PSAP, PSI-P | PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding

Coordinates

chrA05:-:475006..476177

Molecular Weight (calculated)

19424.1 Da

IEP (calculated)

8.178

GRAVY (calculated)

-0.002

Length

183 amino acids

Sequence
(BLAST)

001: MASLSVSASS TIIDSRAPPP SSRQASSSSP SCISLPTLPP QPAQSQTRAA KATAYCRKIV RNVLTRAADV EVAATTQVEA PATNTEAAST ELPDIVKTVQ
101: EAWDKVEDKY AVSSLAVSGF VALWGTAGVI SAIDRLPLVP GVLEVVGIGY TGWFAYKNLI FKPDRETLIQ KVKDTYRDII GSN

Best Arabidopsis Sequence Match ( AT2G46820.1 )
(BLAST)

001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Arabidopsis Description

CURT1BProtein CURVATURE THYLAKOID 1B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.