Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P17930_001 | Banana | cytosol | 53.28 | 64.6 |
| GSMUA_Achr7P12860_001 | Banana | plastid | 62.04 | 35.71 |
| TraesCS5A01G247100.1 | Wheat | plastid | 38.69 | 28.96 |
| TraesCS5B01G244200.1 | Wheat | mitochondrion, plastid | 38.69 | 28.96 |
| Zm00001d005926_P001 | Maize | plastid | 37.96 | 28.73 |
| TraesCS5D01G253600.1 | Wheat | plastid | 37.96 | 28.42 |
| Os09t0465800-01 | Rice | plastid | 36.5 | 27.62 |
| VIT_00s0199g00110.t01 | Wine grape | plastid | 40.88 | 27.45 |
| VIT_00s0199g00150.t01 | Wine grape | plastid | 40.88 | 27.45 |
| EER99031 | Sorghum | mitochondrion, plastid | 37.23 | 26.7 |
| KRH69655 | Soybean | endoplasmic reticulum | 37.96 | 26.0 |
| KRH74509 | Soybean | plastid | 36.5 | 25.38 |
| AT4G38100.1 | Thale cress | plastid | 35.04 | 24.87 |
| GSMUA_Achr10P... | Banana | plastid | 30.66 | 24.14 |
| GSMUA_Achr3P20270_001 | Banana | plastid | 28.47 | 23.08 |
| HORVU0Hr1G013240.2 | Barley | cytosol | 35.04 | 22.75 |
| GSMUA_Achr8P12340_001 | Banana | plastid | 27.01 | 21.14 |
| GSMUA_AchrUn_... | Banana | plastid | 25.55 | 20.83 |
| Bra010636.1-P | Field mustard | plastid | 28.47 | 20.42 |
| CDX90383 | Canola | plastid | 28.47 | 19.9 |
| CDY52513 | Canola | plastid | 28.47 | 19.21 |
| GSMUA_Achr7P18720_001 | Banana | plastid | 32.12 | 18.88 |
| GSMUA_Achr6P26770_001 | Banana | plastid | 18.98 | 17.93 |
| Solyc11g010480.1.1 | Tomato | plastid | 36.5 | 9.62 |
| PGSC0003DMT400041783 | Potato | plastid | 37.23 | 6.66 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P04200_001 | EnsemblPlants:GSMUA_Achr6T04200_001 | EnsemblPlantsGene:GSMUA_Achr6G04200_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0009579 | GO:GO:0016020 | GO:GO:0016021 | InterPro:CAAD_dom | InterPro:CURT1 | PANTHER:PTHR33222 |
| PANTHER:PTHR33222:SF2 | PFAM:PF14159 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000295601C | UniProt:M0T418 |
| MapMan:35.1 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G04200_001]
Coordinates
chr6:+:2873705..2875846
Molecular Weight (calculated)
14652.1 Da
IEP (calculated)
3.862
GRAVY (calculated)
0.085
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSGEETSAA VVADDAAAKP LEGPSSFTNS SSPGEENPDG GGEAIAEAVD DLLSKLNDQV DSTILFYGAV ALVALWISST IISVIDSIPV FPKVLEVVGL
101: GYTVWFSSRY LIFKETRDDF FSKLDDLKEK ILGRSDD
101: GYTVWFSSRY LIFKETRDDF FSKLDDLKEK ILGRSDD
001: MELCTRSTTI ITHLPASFNG HGYLAGKSVD RISLPLQRNV ASLVLQSRTL RCSRKFPGET VTEETSTGVN EFGVEDRDGV VVAAEEKNSN SEAPQAEDEE
101: TQALEFLNDI KLDSDKTYSI LLYGSGAIVA LYLTSAIVSS LEAIPLFPKL MEVVGLGYTL WFTTRYLLFK RNREELKTKV SEIKKQVLGS DSE
101: TQALEFLNDI KLDSDKTYSI LLYGSGAIVA LYLTSAIVSS LEAIPLFPKL MEVVGLGYTL WFTTRYLLFK RNREELKTKV SEIKKQVLGS DSE
Arabidopsis Description
CURT1DProtein CURVATURE THYLAKOID 1D, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDD3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.