CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 2
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH41254
KRH59988

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01150.1	KRH41254	AT5G41600.1	21798944
AT4G01150.1	KRH59988	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47985	Soybean	plastid	93.86	93.86
Os02t0731600-01	Rice	cytosol	46.63	70.37
AT4G01150.1	Thale cress	plastid	68.71	68.29
VIT_16s0050g02240.t01	Wine grape	plastid	65.64	66.46
PGSC0003DMT400000589	Potato	plastid	67.48	65.87
VIT_15s0046g01470.t01	Wine grape	plastid	66.26	65.06
Bra037380.1-P	Field mustard	plastid	63.19	63.58
CDY48508	Canola	plastid	63.19	63.58
CDX74360	Canola	plasma membrane, plastid	63.8	63.41
CDX91881	Canola	plastid	63.8	63.41
Solyc01g095430.2.1	Tomato	plastid	65.64	62.94
Bra000947.1-P	Field mustard	plastid	63.19	62.8
CDY07178	Canola	plastid	63.8	61.9
Bra008533.1-P	Field mustard	plastid	63.8	61.54
CDY53863	Canola	plastid	63.8	61.54
Zm00001d037323_P001	Maize	plastid	55.83	61.49
EER89571	Sorghum	plastid	55.83	61.49
Zm00001d051785_P001	Maize	plastid	58.28	60.51
CDY01956	Canola	plastid	62.58	60.35
Solyc10g011770.2.1	Tomato	plastid	61.96	59.76
Zm00001d027456_P001	Maize	plastid	52.76	57.33
Os06t0264800-01	Rice	plastid	53.99	56.41
GSMUA_Achr3P20270_001	Banana	plastid	57.67	55.62
TraesCS6A01G292800.2	Wheat	plastid	53.37	55.41
GSMUA_Achr10P...	Banana	plastid	58.9	55.17
TraesCS6B01G323200.2	Wheat	plastid	52.76	54.78
TraesCS7D01G209600.1	Wheat	plastid	52.76	54.43
TraesCS7B01G114100.1	Wheat	plastid	52.76	54.43
TraesCS7A01G206700.1	Wheat	plastid	52.76	54.43
TraesCS6D01G273900.1	Wheat	plastid	52.76	53.75
KXG30819	Sorghum	plastid	57.06	53.45
GSMUA_Achr7P18720_001	Banana	plastid	60.74	42.49
HORVU6Hr1G073100.4	Barley	plastid	55.21	32.03
KRH47274	Soybean	plastid	28.22	31.72
KRH47772	Soybean	plastid	28.22	27.38
KRH06344	Soybean	plastid	28.22	27.38
KRH69655	Soybean	endoplasmic reticulum	32.52	26.5
KRH74509	Soybean	plastid	31.9	26.4
KRH44347	Soybean	plastid	23.31	22.49
KRH68969	Soybean	cytosol	26.38	19.11
KRG97255	Soybean	plastid	22.7	18.41

Protein Annotations

EntrezGene:100775367	MapMan:35.1	EMBL:ACUP02009850	InterPro:CAAD_dom	InterPro:CURT1	EnsemblPlantsGene:GLYMA_16G029300
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0009579	GO:GO:0016020	GO:GO:0016021
UniProt:I1MKN8	EnsemblPlants:KRH06541	ProteinID:KRH06541	ProteinID:KRH06541.1	PFAM:PF14159	PANTHER:PTHR33222
PANTHER:PTHR33222:SF4	TMHMM:TMhelix	UniParc:UPI000233AF19	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr16:-:2796473..2799649

Molecular Weight (calculated)

17664.4 Da

IEP (calculated)

9.957

GRAVY (calculated)

0.120

Length

163 amino acids

Sequence
(BLAST)

001: MAAAAAVTVL LPPRIPTATN VTRCSALPSL PPRGTNTKTT LLLSSLNHFS VSRKSSLLQT RASSEESSSV DANEVFTDLK EKWDALENKS TVLFYGGGAL
101: VAVWLSSILV SAINSVPLLP KIMELVGLGY TGWFVYRYLL FKSSRKELAT DIESLKKKIT GTE

Best Arabidopsis Sequence Match ( AT4G01150.1 )
(BLAST)

001: MAISVAASSS MAVMVPRVPA VSTRCSAVPY LPPRSFGRSS FTVPLKLVSG NGLQKVELLK TRASSEETSS IDTNELITDL KEKWDGLENK STVLIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE

Arabidopsis Description

CURT1AProtein CURVATURE THYLAKOID 1A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04616]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.