Factsheet for Os06t0264800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 7
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0226300-01
Os01t0736900-01
Os02t0265900-01
Os05t0526400-01
Os06t0503400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01150.1	Os01t0226300-01	AT5G41600.1	21798944
AT4G01150.1	Os01t0736900-01	AT5G41600.1	21798944
AT4G01150.1	Os02t0265900-01	AT5G41600.1	21798944
AT4G01150.1	Os05t0526400-01	AT5G41600.1	21798944
AT4G01150.1	Os06t0503400-01	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89571	Sorghum	plastid	81.41	85.81
Zm00001d037323_P001	Maize	plastid	80.77	85.14
TraesCS7B01G114100.1	Wheat	plastid	84.62	83.54
TraesCS7A01G206700.1	Wheat	plastid	84.62	83.54
TraesCS7D01G209600.1	Wheat	plastid	83.97	82.91
Zm00001d027456_P001	Maize	plastid	77.56	80.67
Os02t0731600-01	Rice	cytosol	51.92	75.0
GSMUA_Achr10P...	Banana	plastid	60.9	54.6
KRH06541	Soybean	plastid	56.41	53.99
KRH47985	Soybean	plastid	55.77	53.37
GSMUA_Achr3P20270_001	Banana	plastid	57.69	53.25
AT4G01150.1	Thale cress	plastid	55.13	52.44
PGSC0003DMT400000589	Potato	plastid	55.77	52.1
Bra000947.1-P	Field mustard	plastid	53.85	51.22
CDX74360	Canola	plasma membrane, plastid	53.85	51.22
VIT_16s0050g02240.t01	Wine grape	plastid	52.56	50.93
CDX91881	Canola	plastid	53.21	50.61
VIT_15s0046g01470.t01	Wine grape	plastid	53.21	50.0
Solyc01g095430.2.1	Tomato	plastid	53.85	49.41
Bra037380.1-P	Field mustard	plastid	51.28	49.38
CDY48508	Canola	plastid	51.28	49.38
CDY53863	Canola	plastid	52.56	48.52
Bra008533.1-P	Field mustard	plastid	52.56	48.52
CDY01956	Canola	plastid	51.92	47.93
CDY07178	Canola	plastid	51.28	47.62
Solyc10g011770.2.1	Tomato	plastid	51.28	47.34
GSMUA_Achr7P18720_001	Banana	plastid	58.33	39.06
Os07t0469100-01	Rice	plastid	26.92	28.0
Os09t0465800-01	Rice	plastid	30.13	25.97
Os10t0536500-01	Rice	plasma membrane	26.92	24.42
Os02t0759900-01	Rice	plastid	31.41	23.9
Os06t0217700-01	Rice	plastid	32.69	22.87
Os01t0761000-01	Rice	plastid	21.15	21.85
Os02t0548900-01	Rice	cytosol, vacuole	13.46	20.59

Protein Annotations

MapMan:35.1	EntrezGene:4340704	EMBL:AK060455	EMBL:AK066637	EMBL:AK099532	EMBL:AK105959
ProteinID:BAD54375.1	ProteinID:BAF19252.1	ProteinID:BAS97143.1	InterPro:CAAD_dom	InterPro:CURT1	ProteinID:EAZ36559.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0009579	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:Os06g0264800	EnsemblPlants:Os06t0264800-01	PFAM:PF14159	PANTHER:PTHR33222	PANTHER:PTHR33222:SF4	UniProt:Q5Z6P4
TMHMM:TMhelix	UniParc:UPI0000447007	RefSeq:XP_015643185.1	SEG:seg	:	:

Description

Similar to Threonine endopeptidase. (Os06t0264800-01);Non-protein coding transcript. (Os06t0264800-04)

Coordinates

chr6:-:8751332..8752603

Molecular Weight (calculated)

16667.4 Da

IEP (calculated)

9.916

GRAVY (calculated)

0.246

Length

156 amino acids

Sequence
(BLAST)

001: MAAATAYTVA LLGATGARVP AAPRSAALLP RRGGVLQPLR LQDAPRLSLL RVRAASDDTS TSASGDELVA DLKAKWEAIE DKPTFLLYSG GAVVALWLTT
101: VVVGAINSVP LLPKILELVG LGYTGWFVYR YLLFKESRKE LATDIETLKK KIAGTE

Best Arabidopsis Sequence Match ( AT4G01150.1 )
(BLAST)

001: MAISVAASSS MAVMVPRVPA VSTRCSAVPY LPPRSFGRSS FTVPLKLVSG NGLQKVELLK TRASSEETSS IDTNELITDL KEKWDGLENK STVLIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE

Arabidopsis Description

CURT1AProtein CURVATURE THYLAKOID 1A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04616]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.