Factsheet for Os01t0761000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
mitochondrion 1
plasma membrane 1
vacuole 1

Predictors

GFP

MS/MS

Papers

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0226300-01
Os01t0736900-01
Os02t0265900-01
Os05t0526400-01
Os06t0503400-01
Os08t0560900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G52220.1	Os08t0560900-01	AT1G03130.1	18813226
AT1G52220.1	Os01t0226300-01	AT5G41600.1	21798944
AT1G52220.1	Os01t0736900-01	AT5G41600.1	21798944
AT1G52220.1	Os02t0265900-01	AT5G41600.1	21798944
AT1G52220.1	Os05t0526400-01	AT5G41600.1	21798944
AT1G52220.1	Os06t0503400-01	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G331600.1	Wheat	plastid	74.17	73.68
TraesCS3D01G296900.1	Wheat	plastid	73.51	73.51
TraesCS3A01G304900.1	Wheat	plastid	71.52	71.05
OQU87593	Sorghum	plastid	69.54	70.0
Zm00001d012689_P001	Maize	plastid	70.2	63.86
VIT_09s0002g04360.t01	Wine grape	plastid	46.36	47.95
GSMUA_Achr6P26770_001	Banana	plastid	44.37	46.21
KRH47274	Soybean	plastid	39.74	41.38
Bra018954.1-P	Field mustard	plastid	37.09	38.62
CDY67261	Canola	plastid	37.09	38.62
CDY52984	Canola	plastid	37.09	38.62
AT1G52220.1	Thale cress	plastid	38.41	37.18
Solyc06g066620.2.1	Tomato	plastid	33.77	34.69
KRH44347	Soybean	plastid	37.09	33.14
Os07t0469100-01	Rice	plastid	30.46	30.67
Os10t0536500-01	Rice	plasma membrane	28.48	25.0
Os02t0731600-01	Rice	cytosol	17.22	24.07
Os06t0264800-01	Rice	plastid	21.85	21.15
Os09t0465800-01	Rice	plastid	19.87	16.57
Os02t0759900-01	Rice	plastid	20.53	15.12
Os02t0548900-01	Rice	cytosol, vacuole	9.27	13.73
Os06t0217700-01	Rice	plastid	15.89	10.76

Protein Annotations

MapMan:35.2	EntrezGene:4327018	ProteinID:BAB61215.1	ProteinID:BAB92360.1	ProteinID:BAF06234.2	ProteinID:BAS74454.1
InterPro:CAAD_dom	InterPro:CURT1	ProteinID:EEE55413.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:Os01g0761000	EnsemblPlants:Os01t0761000-01	PFAM:PF14159	PANTHER:PTHR33222	PANTHER:PTHR33222:SF3
UniProt:Q94DS3	TMHMM:TMhelix	UniParc:UPI00000ABC75	RefSeq:XP_015621702.1	SEG:seg	:

Description

Conserved hypothetical protein. (Os01t0761000-01)

Coordinates

chr1:+:32014488..32016245

Molecular Weight (calculated)

16072.7 Da

IEP (calculated)

10.378

GRAVY (calculated)

0.436

Length

151 amino acids

Sequence
(BLAST)

001: MASALAVARP AALVPRGGSE SITGNLPMLP AVPSTRFVSG RMRSRNVVAA KAAQDSSEPS SGSVVKYVQS SFSSPEDLFA LAGIGFAGIA ALWASINLVE
101: VIDKLPVLPL LFELIGILVA WLFIYQNLLF KPDREKFLNN IKSSVSRVLG Q

Best Arabidopsis Sequence Match ( AT1G52220.1 )
(BLAST)

001: MASISATLPS PLLLTQRKSN LTSIQKLPFS LTRGTNDLSP LSLTRNPSSI SLMVKASGES SDSSTDLDVV STIQNVWDKS EDRLGLIGLG FAGIVALWAS
101: LNLITAIDKL PVISSGFELV GILFSTWFTY RYLLFKPDRQ ELSKIVKKSV ADILGQ

Arabidopsis Description

CURT1CCURT1C [Source:UniProtKB/TrEMBL;Acc:A0A178WBD4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.