Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G331600.1 | Wheat | plastid | 96.71 | 96.71 |
| TraesCS3D01G296900.1 | Wheat | plastid | 93.42 | 94.04 |
| Os01t0761000-01 | Rice | plastid | 71.05 | 71.52 |
| OQU87593 | Sorghum | plastid | 65.13 | 66.0 |
| Zm00001d012689_P001 | Maize | plastid | 67.76 | 62.05 |
| VIT_09s0002g04360.t01 | Wine grape | plastid | 42.76 | 44.52 |
| GSMUA_Achr6P26770_001 | Banana | plastid | 40.79 | 42.76 |
| KRH47274 | Soybean | plastid | 39.47 | 41.38 |
| CDY67261 | Canola | plastid | 36.84 | 38.62 |
| Bra018954.1-P | Field mustard | plastid | 36.18 | 37.93 |
| CDY52984 | Canola | plastid | 36.18 | 37.93 |
| AT1G52220.1 | Thale cress | plastid | 35.53 | 34.62 |
| Solyc06g066620.2.1 | Tomato | plastid | 32.89 | 34.01 |
| KRH44347 | Soybean | plastid | 35.53 | 31.95 |
| TraesCS1A01G200000.2 | Wheat | plastid | 28.29 | 25.29 |
| TraesCS6A01G292800.2 | Wheat | plastid | 23.03 | 22.29 |
| TraesCS2A01G235000.2 | Wheat | mitochondrion, plastid | 23.68 | 21.69 |
| TraesCS7A01G206700.1 | Wheat | plastid | 21.71 | 20.89 |
| TraesCS7A01G175800.1 | Wheat | plastid | 21.05 | 18.5 |
| TraesCS5A01G247100.1 | Wheat | plastid | 19.08 | 15.85 |
| TraesCS6A01G314600.1 | Wheat | plastid | 18.42 | 15.14 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G304900.1 | EnsemblPlantsGene:TraesCS3A01G304900 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0016020 | InterPro:CAAD_dom |
| InterPro:CURT1 | PANTHER:PTHR33222 | PANTHER:PTHR33222:SF3 | PFAM:PF14159 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:540969295..540971874
Molecular Weight (calculated)
16186.0 Da
IEP (calculated)
10.536
GRAVY (calculated)
0.418
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MMACALSIAQ PTALAPCGGG GGGSSKIVPR NLPKLRSPMV SGRMRSRAVV ARAAQDSSEA SSGSVVRYVK SSFNTTEDIF ALAGIGFAAI AAFWASMMLI
101: GVIDKLPVLP LFFELIGIAV AWWFIYGNLL FKPDREKFLE NIKSSASRIL GQ
101: GVIDKLPVLP LFFELIGIAV AWWFIYGNLL FKPDREKFLE NIKSSASRIL GQ
001: MASISATLPS PLLLTQRKSN LTSIQKLPFS LTRGTNDLSP LSLTRNPSSI SLMVKASGES SDSSTDLDVV STIQNVWDKS EDRLGLIGLG FAGIVALWAS
101: LNLITAIDKL PVISSGFELV GILFSTWFTY RYLLFKPDRQ ELSKIVKKSV ADILGQ
101: LNLITAIDKL PVISSGFELV GILFSTWFTY RYLLFKPDRQ ELSKIVKKSV ADILGQ
Arabidopsis Description
CURT1CCURT1C [Source:UniProtKB/TrEMBL;Acc:A0A178WBD4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.