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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • cytosol 1
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037380.1-P Field mustard plastid 100.0 100.0
CDY07178 Canola plastid 97.53 94.05
CDY53863 Canola plastid 91.98 88.17
CDY01956 Canola plastid 91.36 87.57
CDX91881 Canola plastid 88.27 87.2
CDX74360 Canola plasma membrane, plastid 87.65 86.59
AT4G01150.1 Thale cress plastid 84.57 83.54
Os02t0731600-01 Rice cytosol 47.53 71.3
KRH47985 Soybean plastid 64.2 63.8
KRH06541 Soybean plastid 63.58 63.19
VIT_16s0050g02240.t01 Wine grape plastid 61.11 61.49
PGSC0003DMT400000589 Potato plastid 62.35 60.48
VIT_15s0046g01470.t01 Wine grape plastid 59.26 57.83
Solyc01g095430.2.1 Tomato plastid 60.49 57.65
EER89571 Sorghum plastid 52.47 57.43
Solyc10g011770.2.1 Tomato plastid 59.88 57.4
Zm00001d037323_P001 Maize plastid 51.85 56.76
Zm00001d051785_P001 Maize plastid 54.32 56.05
Zm00001d027456_P001 Maize plastid 50.62 54.67
TraesCS6A01G292800.2 Wheat plastid 52.47 54.14
TraesCS6B01G323200.2 Wheat plastid 51.85 53.5
GSMUA_Achr10P... Banana plastid 56.79 52.87
TraesCS6D01G273900.1 Wheat plastid 51.85 52.5
GSMUA_Achr3P20270_001 Banana plastid 54.32 52.07
Os06t0264800-01 Rice plastid 49.38 51.28
TraesCS7A01G206700.1 Wheat plastid 50.0 51.27
TraesCS7D01G209600.1 Wheat plastid 49.38 50.63
TraesCS7B01G114100.1 Wheat plastid 49.38 50.63
KXG30819 Sorghum plastid 53.09 49.43
GSMUA_Achr7P18720_001 Banana plastid 57.41 39.91
HORVU6Hr1G073100.4 Barley plastid 54.32 31.32
CDY52984 Canola plastid 26.54 29.66
CDY67261 Canola plastid 25.93 28.97
CDY27520 Canola plastid 27.16 28.03
CDX90383 Canola plastid 33.33 27.55
CDY27519 Canola mitochondrion 21.6 27.34
CDY48012 Canola plastid 27.78 26.95
CDY52513 Canola plastid 32.1 25.62
CDY41562 Canola plastid 28.4 25.14
CDX80050 Canola plastid 28.4 25.14
Protein Annotations
MapMan:35.1GO:A0A078IHB0UniProt:A0A078IHB0InterPro:CAAD_domEnsemblPlants:CDY48508ProteinID:CDY48508
ProteinID:CDY48508.1InterPro:CURT1ncoils:CoilGO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0009579GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00091207001PFAM:PF14159PANTHER:PTHR33222
PANTHER:PTHR33222:SF4TMHMM:TMhelixUniParc:UPI00025420FASEG:seg::
Description
BnaA09g00150DBnaA09g00150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHB0]
Coordinates
chrLK032776:+:62979..64528
Molecular Weight (calculated)
17590.5 Da
IEP (calculated)
9.643
GRAVY (calculated)
0.172
Length
162 amino acids
Sequence
(BLAST)
001: MAMTLAASSS VVVMIPRVST VSYLPPLPPR SFGRSSFTVP LKLVSGNGLQ KVELMKTRAS SSDETSASID TNELFNDLKE KWDGLENKTT VVIYGGGAIV
101: AVWLSSILVG AINSVPLLPK VMELVGLGYT GWFVYRYLLF KSSRKELAED IDSLKKKIAG TE
Best Arabidopsis Sequence Match ( AT4G01150.1 )
(BLAST)
001: MAISVAASSS MAVMVPRVPA VSTRCSAVPY LPPRSFGRSS FTVPLKLVSG NGLQKVELLK TRASSEETSS IDTNELITDL KEKWDGLENK STVLIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE
Arabidopsis Description
CURT1AProtein CURVATURE THYLAKOID 1A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04616]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.