Factsheet for HORVU6Hr1G073100.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G082010.3
HORVU3Hr1G030760.2
HORVU3Hr1G069970.2
HORVU7Hr1G075700.2
HORVU7Hr1G081290.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01150.1	HORVU1Hr1G082010.3	AT5G41600.1	21798944
AT4G01150.1	HORVU3Hr1G030760.2	AT5G41600.1	21798944
AT4G01150.1	HORVU3Hr1G069970.2	AT5G41600.1	21798944
AT4G01150.1	HORVU7Hr1G075700.2	AT5G41600.1	21798944
AT4G01150.1	HORVU7Hr1G081290.4	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G323200.2	Wheat	plastid	50.18	89.81
TraesCS6D01G273900.1	Wheat	plastid	50.53	88.75
TraesCS6A01G292800.2	Wheat	plastid	49.47	88.53
Os02t0731600-01	Rice	cytosol	33.45	87.04
Zm00001d051785_P001	Maize	plastid	46.98	84.08
KXG30819	Sorghum	plastid	46.98	75.86
PGSC0003DMT400000589	Potato	plastid	34.52	58.08
AT4G01150.1	Thale cress	plastid	33.81	57.93
CDX74360	Canola	plasma membrane, plastid	33.45	57.32
Bra000947.1-P	Field mustard	plastid	33.1	56.71
GSMUA_Achr10P...	Banana	plastid	34.88	56.32
CDX91881	Canola	plastid	32.74	56.1
Solyc01g095430.2.1	Tomato	plastid	33.45	55.29
VIT_16s0050g02240.t01	Wine grape	plastid	31.67	55.28
KRH06541	Soybean	plastid	32.03	55.21
KRH47985	Soybean	plastid	32.03	55.21
CDY01956	Canola	plastid	33.1	55.03
GSMUA_Achr3P20270_001	Banana	plastid	32.74	54.44
Bra008533.1-P	Field mustard	plastid	32.74	54.44
CDY53863	Canola	plastid	32.74	54.44
CDY48508	Canola	plastid	31.32	54.32
Bra037380.1-P	Field mustard	plastid	31.32	54.32
VIT_15s0046g01470.t01	Wine grape	plastid	31.67	53.61
CDY07178	Canola	plastid	31.67	52.98
Solyc10g011770.2.1	Tomato	plastid	31.67	52.66
GSMUA_Achr7P18720_001	Banana	plastid	40.21	48.5
HORVU7Hr1G036280.1	Barley	plastid	17.44	27.22
HORVU1Hr1G051700.6	Barley	plastid	16.01	25.57
HORVU0Hr1G013240.2	Barley	cytosol	15.3	20.38
HORVU6Hr1G077440.3	Barley	mitochondrion	17.08	16.96

Protein Annotations

EnsemblPlants:HORVU6Hr1G073100.4	EnsemblPlantsGene:HORVU6Hr1G073100	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0009579
GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	ncoils:Coil	PANTHER:PTHR33222
PANTHER:PTHR33222:SF4	PFAM:PF14159	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B487496	UniProt:A0A287UNK0
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:507158560..507164872

Molecular Weight (calculated)

29981.3 Da

IEP (calculated)

10.592

GRAVY (calculated)

-0.128

Length

281 amino acids

Sequence
(BLAST)

001: HRAKASNQIP AGTQGKGKRG PGTHRTRSVP AQARAREELA GEDMAATAYS AALLGGAGAR LPVVFAAAAS PSAVLPRRNF SPFRLQDAPR LSLLPAKASS
101: DDTSTSAASG DELVDDLKAK WDAVENKSTV LTYAGGAIVA VWFSSVIVGA INSLPLLPKI MELVGLGYTG WFVYRYLLFK ESRKELADDV ESLKKSIAGT
201: EAENGRTCTL LCPTWSSLIS GRKVKAAAPR VNMLLIVKKA KMLQTAVKKK NNLLHAASRD PSNVMTQWLL QAKQSPPAVE M

Best Arabidopsis Sequence Match ( AT4G01150.1 )
(BLAST)

001: MAISVAASSS MAVMVPRVPA VSTRCSAVPY LPPRSFGRSS FTVPLKLVSG NGLQKVELLK TRASSEETSS IDTNELITDL KEKWDGLENK STVLIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE

Arabidopsis Description

CURT1AProtein CURVATURE THYLAKOID 1A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04616]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.