CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89811
EES19841
KXG31516
KXG33320
OQU84758

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01150.1	EER89811	AT5G41600.1	21798944
AT4G01150.1	EES19841	AT5G41600.1	21798944
AT4G01150.1	KXG31516	AT5G41600.1	21798944
AT4G01150.1	KXG33320	AT5G41600.1	21798944
AT4G01150.1	OQU84758	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051785_P001	Maize	plastid	84.48	93.63
Os02t0731600-01	Rice	cytosol	52.87	85.19
EER89571	Sorghum	plastid	68.39	80.41
TraesCS6B01G323200.2	Wheat	plastid	71.84	79.62
TraesCS6A01G292800.2	Wheat	plastid	71.84	79.62
TraesCS6D01G273900.1	Wheat	plastid	72.41	78.75
VIT_16s0050g02240.t01	Wine grape	plastid	55.17	59.63
PGSC0003DMT400000589	Potato	plastid	56.32	58.68
KRH06541	Soybean	plastid	53.45	57.06
KRH47985	Soybean	plastid	52.87	56.44
AT4G01150.1	Thale cress	plastid	52.87	56.1
Solyc01g095430.2.1	Tomato	plastid	54.6	55.88
GSMUA_Achr10P...	Banana	plastid	55.75	55.75
GSMUA_Achr3P20270_001	Banana	plastid	54.02	55.62
CDX74360	Canola	plasma membrane, plastid	51.72	54.88
VIT_15s0046g01470.t01	Wine grape	plastid	52.3	54.82
Solyc10g011770.2.1	Tomato	plastid	52.87	54.44
Bra000947.1-P	Field mustard	plastid	51.15	54.27
CDX91881	Canola	plastid	51.15	54.27
CDY48508	Canola	plastid	49.43	53.09
Bra037380.1-P	Field mustard	plastid	49.43	53.09
CDY53863	Canola	plastid	50.57	52.07
CDY01956	Canola	plastid	50.57	52.07
Bra008533.1-P	Field mustard	plastid	50.57	52.07
CDY07178	Canola	plastid	50.0	51.79
HORVU6Hr1G073100.4	Barley	plastid	75.86	46.98
GSMUA_Achr7P18720_001	Banana	plastid	57.47	42.92
EES15027	Sorghum	mitochondrion	36.21	40.13
EER97176	Sorghum	mitochondrion, plastid	27.01	31.97
EER99031	Sorghum	mitochondrion, plastid	29.31	26.7
KXG39014	Sorghum	plastid	24.71	24.71
OQU87593	Sorghum	plastid	18.97	22.0
KXG31149	Sorghum	nucleus	28.74	14.41

Protein Annotations

EnsemblPlants:KXG30819	EnsemblPlantsGene:SORBI_3004G249800	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0009579
GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222	PANTHER:PTHR33222:SF4
PFAM:PF14159	ProteinID:KXG30819	ProteinID:KXG30819.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0001C80D6F
UniProt:A0A194YRF9	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:59655857..59658863

Molecular Weight (calculated)

18208.1 Da

IEP (calculated)

9.690

GRAVY (calculated)

0.172

Length

174 amino acids

Sequence
(BLAST)

001: MAATTAYSTA LLGGARLPSA RGAAAPPSSL GLLPLRSPLP LRLQVQDSAP PRLSLLRVKA SSDDSSAASG DELIADLKAK WDAVENKSTV LTYAGGAVVA
101: LWLTSVIVGA INSVPLLPKI MELVGLGYTG WFVYRYLLFK ESRKELADDI ESLKKKIAGS EPRIASVAGQ GNGC

Best Arabidopsis Sequence Match ( AT4G01150.1 )
(BLAST)

001: MAISVAASSS MAVMVPRVPA VSTRCSAVPY LPPRSFGRSS FTVPLKLVSG NGLQKVELLK TRASSEETSS IDTNELITDL KEKWDGLENK STVLIYGGGA
101: IVAVWLSSIV VGAINSVPLL PKVMELVGLG YTGWFVYRYL LFKSSRKELA EDIESLKKKI AGSE

Arabidopsis Description

CURT1AProtein CURVATURE THYLAKOID 1A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04616]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.