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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:nucleus
 mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG88846
KRG90495
KRG91881
KRG93809
KRG93820
KRG94268
KRG96705
KRG97275
KRG98516
KRH01468
KRH06317
KRH08383
KRH10001
KRH10292
KRH14989
KRH16232
KRH18270
KRH18296
KRH23030
KRH23330
KRH24835
KRH29838
KRH33787
KRH34890
KRH41254
KRH44167
KRH45179
KRH46356
KRH47141
KRH47737
KRH52673
KRH53288
KRH53581
KRH57705
KRH59988
KRH62014
KRH64355
KRH64617
KRH68422
KRH70041
KRH73149
KRH73903
KRH75315
KRH75962

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G11220.1 KRG90495 AT1G09330.1 21798944
AT4G11220.1 KRG96705 AT1G09330.1 21798944
AT4G11220.1 KRH33787 AT1G09330.1 21798944
AT4G11220.1 KRH68422 AT1G09330.1 21798944
AT4G11220.1 KRG93809 AT3G59500.1 21798944
AT4G11220.1 KRH01468 AT3G59500.1 21798944
AT4G11220.1 KRH18296 AT3G59500.1 21798944
AT4G11220.1 KRH45179 AT3G59500.1 21798944
AT5G41600.1 KRH10001 AT1G55190.1 21798944
AT5G41600.1 KRH23330 AT1G55190.1 21798944
AT5G41600.1 KRH44167 AT1G55190.1 21798944
AT5G41600.1 KRH47141 AT1G55190.1 21798944
AT5G41600.1 KRH53288 AT1G77350.1 21798944
AT5G41600.1 KRH64617 AT1G77350.1 21798944
AT5G41600.1 KRH16232 AT2G03120.1 21798944
AT5G41600.1 KRH52673 AT2G03120.1 21798944
AT5G41600.1 KRH62014 AT2G03120.1 21798944
AT5G41600.1 KRH14989 AT2G39960.1 21798944
AT5G41600.1 KRH73149 AT2G39960.1 21798944
AT5G41600.1 KRG97275 AT2G46890.1 21798944
AT5G41600.1 KRH06317 AT2G46890.1 21798944
AT5G41600.1 KRH47737 AT2G46890.1 21798944
AT5G41600.1 KRG93820 AT3G02420.1 21798944
AT5G41600.1 KRH18270 AT3G02420.1 21798944
AT5G41600.1 KRG91881 AT3G07950.1 21798944
AT5G41600.1 KRH08383 AT3G07950.1 21798944
AT5G41600.1 KRH34890 AT3G07950.1 21798944
AT5G41600.1 KRH70041 AT3G07950.1 21798944
AT5G41600.1 KRH75962 AT3G07950.1 21798944
AT5G41600.1 KRG98516 AT3G13175.1 21798944
AT5G41600.1 KRH46356 AT3G13175.1 21798944
AT5G41600.1 KRH73903 AT3G13175.1 21798944
AT5G41600.1 KRG94268 AT3G27080.1 21798944
AT5G41600.1 KRH57705 AT3G27080.1 21798944
AT5G41600.1 KRG88846 AT3G28050.1 21798944
AT5G41600.1 KRH75315 AT3G28050.1 21798944
AT5G41600.1 KRH10292 AT3G46060.1 21798944
AT5G41600.1 KRH23030 AT3G46060.1 21798944
AT5G41600.1 KRH24835 AT3G46060.1 21798944
AT5G41600.1 KRH29838 AT3G46060.1 21798944
AT5G41600.1 KRG93809 AT3G59500.1 21798944
AT5G41600.1 KRH01468 AT3G59500.1 21798944
AT5G41600.1 KRH18296 AT3G59500.1 21798944
AT5G41600.1 KRH45179 AT3G59500.1 21798944
AT5G41600.1 KRH41254 AT5G41600.1 21798944
AT5G41600.1 KRH59988 AT5G41600.1 21798944
AT5G41600.1 KRH53581 AT5G53560.1 21798944
AT5G41600.1 KRH64355 AT5G53560.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH41254 Soybean cytosol, nucleus, plasma membrane 95.28 95.28
VIT_02s0025g00640.t01 Wine grape cytosol, nucleus, plasma membrane 75.59 76.19
Os01t0226300-01 Rice plasma membrane 50.39 71.91
KRG99174 Soybean endoplasmic reticulum, plasma membrane 24.41 71.26
PGSC0003DMT400032086 Potato cytosol, nucleus, plasma membrane 74.8 70.37
GSMUA_Achr8P27830_001 Banana cytosol, peroxisome, plasma membrane 69.29 70.12
Solyc08g081730.2.1 Tomato endoplasmic reticulum, plastid 74.41 70.0
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 70.87 69.77
KRH40357 Soybean endoplasmic reticulum 70.47 69.65
KRH00872 Soybean endoplasmic reticulum 70.87 69.5
KRH06560 Soybean endoplasmic reticulum 69.69 69.14
GSMUA_Achr9P05440_001 Banana nucleus, peroxisome, plasma membrane 67.32 68.13
CDY34396 Canola cytosol, endoplasmic reticulum, nucleus 66.93 67.73
AT5G41600.1 Thale cress cytosol, nucleus, plasma membrane 68.5 67.7
CDY08353 Canola cytosol, endoplasmic reticulum, nucleus 66.54 67.6
CDY38194 Canola cytosol, nucleus, plasma membrane 66.54 67.6
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 66.54 67.06
Bra027678.1-P Field mustard cytosol, endoplasmic reticulum, nucleus 66.14 66.93
CDY25557 Canola cytosol, endoplasmic reticulum, nucleus 66.14 66.93
Bra027757.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 65.75 66.8
Os01t0736900-01 Rice plasma membrane 66.14 66.4
CDX90792 Canola cytosol, peroxisome, plasma membrane 69.69 66.29
Bra010539.1-P Field mustard cytosol 70.08 66.17
AT4G11220.1 Thale cress nucleus 70.47 66.05
Bra000739.1-P Field mustard cytosol 69.29 65.92
CDY24806 Canola cytosol 70.87 65.69
CDY41666 Canola cytosol 71.26 65.58
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, plasma membrane 64.96 65.48
Os05t0526400-01 Rice plasma membrane 64.57 65.34
CDY10954 Canola cytosol 69.29 65.19
Bra019285.1-P Field mustard cytosol 68.5 64.93
GSMUA_Achr3P31920_001 Banana cytosol 55.91 64.84
CDY57657 Canola cytosol, nucleus, plasma membrane 70.08 64.73
AT4G23630.2 Thale cress nucleus 70.08 64.73
Zm00001d043551_P003 Maize plasma membrane 65.35 64.59
Bra013717.1-P Field mustard nucleus 70.08 64.49
CDY44123 Canola cytosol, nucleus, plasma membrane 70.08 64.49
Zm00001d012776_P001 Maize extracellular 64.17 64.43
GSMUA_Achr4P08400_001 Banana cytosol 64.17 64.43
EES19841 Sorghum cytosol, nucleus, plasma membrane 64.57 64.31
TraesCS1B01G360800.1 Wheat cytosol, nucleus, plasma membrane 62.6 63.86
TraesCS1D01G349700.1 Wheat cytosol, nucleus, plasma membrane 62.2 63.71
KXG33320 Sorghum cytosol, nucleus, plasma membrane 64.57 63.57
AT1G64090.2 Thale cress cytosol, endoplasmic reticulum, nucleus 67.72 63.47
HORVU3Hr1G069970.2 Barley cytosol, nucleus, plasma membrane 63.39 63.14
TraesCS3D01G279100.1 Wheat cytosol, nucleus, plasma membrane 61.42 62.9
TraesCS3B01G313000.1 Wheat cytosol, nucleus, plasma membrane 62.6 62.85
Zm00001d038768_P001 Maize extracellular, mitochondrion 62.6 62.6
TraesCS3A01G278800.1 Wheat golgi 61.02 62.5
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 60.63 61.6
Zm00001d008982_P001 Maize cytosol, nucleus, plasma membrane 67.32 61.29
KXG31516 Sorghum cytosol, nucleus, plasma membrane 68.11 60.92
CDY13240 Canola cytosol, peroxisome, plasma membrane 38.58 60.87
TraesCS3D01G159100.1 Wheat cytosol, nucleus, plasma membrane 68.5 60.84
TraesCS3B01G178100.1 Wheat cytosol, nucleus, plasma membrane 67.72 60.14
KRH35223 Soybean cytosol, nucleus, plasma membrane 58.66 59.6
KRH48008 Soybean cytosol, peroxisome, plasma membrane 72.83 58.92
Zm00001d039316_P001 Maize cytosol, nucleus, plasma membrane 67.72 56.21
HORVU3Hr1G030760.2 Barley mitochondrion 68.5 55.41
Zm00001d020229_P001 Maize plasma membrane 33.07 55.26
CDY05135 Canola mitochondrion 66.93 54.31
Zm00001d016041_P001 Maize extracellular 48.82 53.91
Os02t0265900-01 Rice cytosol, peroxisome, plasma membrane 48.82 53.91
TraesCS3A01G151200.1 Wheat cytosol, peroxisome, plasma membrane 67.72 53.42
OQU84758 Sorghum cytosol, peroxisome, plasma membrane 48.03 52.59
EER89811 Sorghum peroxisome 52.36 51.95
Zm00001d020729_P001 Maize plasma membrane 19.29 51.58
TraesCS1A01G346800.3 Wheat plasma membrane 50.79 51.19
Zm00001d037453_P001 Maize cytosol, peroxisome, plasma membrane 51.18 49.81
TraesCS7A01G341800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 50.79 49.62
TraesCS7B01G241100.1 Wheat cytosol, peroxisome, plasma membrane, plastid 50.79 49.62
TraesCS7D01G337800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 50.39 49.23
Os06t0503400-01 Rice plasma membrane 50.39 48.3
HORVU1Hr1G082010.3 Barley cytosol, nucleus, plasma membrane, plastid 49.61 48.28
KRH45979 Soybean cytosol, nucleus, plasma membrane 46.06 48.15
KRH14529 Soybean cytosol, peroxisome, plasma membrane 44.49 46.12
HORVU7Hr1G081290.4 Barley plastid 41.34 45.45
CDY62522 Canola cytosol 14.17 45.0
KRH73588 Soybean plasma membrane 42.52 44.08
HORVU7Hr1G075700.2 Barley mitochondrion 50.79 43.0
KRG99024 Soybean plasma membrane 44.49 42.8
KRG91601 Soybean mitochondrion 57.09 42.65
Bra035242.1-P Field mustard cytosol 33.46 42.5
CDX86802 Canola cytosol, nucleus, peroxisome 40.16 41.63
GSMUA_Achr3P15760_001 Banana cytosol 24.41 41.33
KRG91024 Soybean plasma membrane 33.07 41.18
KRH48561 Soybean plasma membrane 35.83 40.99
KRH35899 Soybean plasma membrane 33.46 40.09
KRH39144 Soybean plasma membrane 35.04 40.09
KRH35738 Soybean endoplasmic reticulum 31.89 39.71
KRH66004 Soybean endoplasmic reticulum, golgi, plasma membrane 30.71 37.32
KRH75801 Soybean plasma membrane 29.92 36.36
KRH30696 Soybean plasma membrane 33.86 34.96
KRH18469 Soybean plasma membrane 26.38 33.84
KRG93546 Soybean plasma membrane 26.38 33.67
KRH28521 Soybean endoplasmic reticulum 26.77 32.08
KRH76938 Soybean endoplasmic reticulum, plasma membrane 18.11 28.57
Protein Annotations
EntrezGene:100779587MapMan:13.7.2.1UniProt:A0A0R0K5J9EMBL:ACUP02003347EnsemblPlantsGene:GLYMA_05G212800GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020
GO:GO:0016021InterPro:IPR003388ProteinID:KRH59986.1ProteinID:KRH59987.1EnsemblPlants:KRH59988ProteinID:KRH59988
ProteinID:KRH59988.1PFAM:PF02453PFscan:PS50845PANTHER:PTHR10994PANTHER:PTHR10994:SF70InterPro:Reticulon
TMHMM:TMhelixUniParc:UPI00001AB8D0SEG:seg:::
Description
hypothetical protein
Coordinates
chr5:+:39426623..39432790
Molecular Weight (calculated)
28568.6 Da
IEP (calculated)
8.667
GRAVY (calculated)
0.027
Length
254 amino acids
Sequence
(BLAST)
001: MAEHHEHEEV KGESLLEKIS GKIHDHDSSS SSDSDNDKTS ATDSFKSNVF RLFGREKPIH HVLGGGKPAD VFLWRNKKIS ASTLGVATAI WVLFELLEYH
101: LLTLVCHFLI LALAGLFLWS NASTFINKSP PKIPQVHIPE EPVLKFASAL RIEINRAFAV LRDIASGRDL KKFLSVIAGL WVFSILGCWA NFLTLFYIAF
201: VLLHTVPVLY EKYEDHVDSF GEKAIAEIKK QYAVFDAKVL SKIPRGPLKD KKKD
Best Arabidopsis Sequence Match ( AT4G11220.1 )
(BLAST)
001: MADEHKHEES SPNLDPAVEV VERESLMEKL SEKIHHKGDS SSSSSSDDEN EKKSSSSSPK SLKSKVYRLF GRERPVHKVL GGGKPADIFM WKDKKMSGGV
101: FGGATVAWVL FELMEYHLLT LLCHVMIVAL AVLFLWSNAT MFIHKSPPKI PEVHIPEEPL LQLASGLRIE INRGISSLRE IASGRDIKKF LSAIAGLWVL
201: SILGGCYSFL TLAYIALVLL FTVPLFYDKY EDKVDSYGEK AMAELKKQYA VLDAKVFSKI PRGPLKDKKK D
Arabidopsis Description
RTNLB2Reticulon-like protein B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUT9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.