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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • plasma membrane 4
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH14529 Soybean cytosol, peroxisome, plasma membrane 95.92 95.92
KRH45979 Soybean cytosol, nucleus, plasma membrane 74.29 74.9
VIT_12s0028g01090.t01 Wine grape cytosol, peroxisome, plasma membrane 69.39 68.55
KRG99024 Soybean plasma membrane 73.47 68.18
PGSC0003DMT400002449 Potato cytosol, nucleus, plasma membrane 68.16 65.75
GSMUA_Achr6P04560_001 Banana cytosol, peroxisome, plasma membrane 65.71 64.92
Solyc07g044880.2.1 Tomato mitochondrion 36.73 63.38
Solyc12g006290.1.1 Tomato nucleus 59.59 62.66
EER90788 Sorghum cytosol, nucleus, plasma membrane 58.78 58.3
Os03t0781700-01 Rice cytosol, peroxisome, plasma membrane 58.78 58.3
Zm00001d034313_P001 Maize cytosol, nucleus, plasma membrane 58.78 58.06
Bra029827.1-P Field mustard plasma membrane 55.92 57.32
CDY08616 Canola plasma membrane 55.92 57.32
CDY00916 Canola plasma membrane 55.92 57.32
Os07t0142000-01 Rice plasma membrane 57.14 56.91
GSMUA_Achr9P10200_001 Banana cytosol, peroxisome, plasma membrane 55.51 56.2
TraesCS2D01G254800.1 Wheat cytosol, peroxisome, vacuole 55.51 55.06
AT3G10260.3 Thale cress plasma membrane 59.59 54.68
TraesCS2B01G267800.2 Wheat cytosol, peroxisome, vacuole 55.1 54.66
TraesCS5B01G420300.1 Wheat cytosol, nucleus, plasma membrane 57.14 54.05
HORVU5Hr1G101680.2 Barley cytosol, endoplasmic reticulum, peroxisome 57.55 54.02
Zm00001d018781_P001 Maize extracellular, mitochondrion 53.47 53.91
TraesCS2A01G254300.1 Wheat cytosol, peroxisome, vacuole 54.29 53.85
TraesCS5D01G426200.1 Wheat cytosol, peroxisome, plasma membrane 56.73 53.67
TraesCS5A01G418200.1 Wheat cytosol, peroxisome, plasma membrane 57.14 53.64
PGSC0003DMT400074138 Potato plasma membrane 63.27 51.67
KXG34376 Sorghum plasma membrane 55.92 43.63
KRH41254 Soybean cytosol, nucleus, plasma membrane 44.49 42.91
KRH59988 Soybean mitochondrion 44.08 42.52
CDY56712 Canola mitochondrion 59.18 40.85
KRH06560 Soybean endoplasmic reticulum 42.45 40.62
CDX82165 Canola endoplasmic reticulum, peroxisome, plasma membrane, plastid 40.0 39.52
KRH00872 Soybean endoplasmic reticulum 41.63 39.38
KRH40357 Soybean endoplasmic reticulum 41.22 39.3
KRH39144 Soybean plasma membrane 34.69 38.29
KRH48561 Soybean plasma membrane 34.29 37.84
KRG91024 Soybean plasma membrane 31.02 37.25
KRH35899 Soybean plasma membrane 31.84 36.79
KRH35738 Soybean endoplasmic reticulum 30.2 36.27
HORVU2Hr1G060770.16 Barley plasma membrane 54.29 34.73
KRH35223 Soybean cytosol, nucleus, plasma membrane 34.69 34.0
KRH48008 Soybean cytosol, peroxisome, plasma membrane 42.86 33.44
KRH28521 Soybean endoplasmic reticulum 28.57 33.02
KRH75801 Soybean plasma membrane 27.76 32.54
KRG93546 Soybean plasma membrane 26.12 32.16
KRH66004 Soybean endoplasmic reticulum, golgi, plasma membrane 27.35 32.06
KRH18469 Soybean plasma membrane 25.71 31.82
KRH30696 Soybean plasma membrane 29.8 29.67
KRG99174 Soybean endoplasmic reticulum, plasma membrane 10.2 28.74
KRH76938 Soybean endoplasmic reticulum, plasma membrane 17.96 27.33
KRG91601 Soybean mitochondrion 34.29 24.71
Protein Annotations
EntrezGene:100500122MapMan:13.7.2.1EMBL:ACUP02001285EnsemblPlantsGene:GLYMA_02G282400GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021
UniProt:I1JJ04InterPro:IPR003388EnsemblPlants:KRH73588ProteinID:KRH73588ProteinID:KRH73588.1ProteinID:KRH73589.1
PFAM:PF02453PFscan:PS50845PANTHER:PTHR10994PANTHER:PTHR10994:SF62InterPro:ReticulonTMHMM:TMhelix
UniParc:UPI0002337155SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:-:46455497..46459253
Molecular Weight (calculated)
27679.7 Da
IEP (calculated)
9.768
GRAVY (calculated)
0.140
Length
245 amino acids
Sequence
(BLAST)
001: MSEKITAENL LNTLVETLTE KQKSGSFFEE DKSSSVSYQF NRLFGRQKPV HHILGGGKSA DVLLWRNKKI SASVLSAATA IWVLFEWLNY NFITILFFVV
101: ALGMLGQFLW TNVSGLFSRK PSKVPRFVLP DDIFVNIATV VGAEVNRGLR FLQDVSCGGS LKQFLIVVVS LWAGAVIGSW CNFLTVMYIG FVAAHTLPVL
201: YERYEDQVDN FVYKVFDQMQ NHYQKLDTGL LSKIPKGKLK GKKYE
Best Arabidopsis Sequence Match ( AT3G10260.3 )
(BLAST)
001: MKSTFICKLS NLRFRLCFRI MPDKNIVEDV IGDLVDNFTE TVQKNKHGSS FFEQEDSVSS RFNRLFDRQK PIHHVLGGGK SADVLLWRNK KISASVLMGA
101: TAIWVLFEWI NFHFLSLVCY ALLLGMIAQF VWSNASGFLN RSQSRVPRLV LPKDFFAEVG VAVGKEVNRG LLFLQDLACK GNLKQFLMAV IGLWVAAMVG
201: SCCNFLTVLY IGFVGAHTMP VLYERYEDEV DGFMDSMIMK FHSHYKKLDT GFLSRIPSGK FGLKKRE
Arabidopsis Description
Reticulon family protein [Source:TAIR;Acc:AT3G10260]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.