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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 5
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY00916 Canola plasma membrane 58.87 87.45
CDY08616 Canola plasma membrane 58.03 86.19
AT3G10260.3 Thale cress plasma membrane 62.54 83.15
CDX82165 Canola endoplasmic reticulum, peroxisome, plasma membrane, plastid 49.01 70.16
Solyc12g006290.1.1 Tomato nucleus 40.85 62.23
KRH45979 Soybean cytosol, nucleus, plasma membrane 40.56 59.26
KRH14529 Soybean cytosol, peroxisome, plasma membrane 40.85 59.18
KRH73588 Soybean plasma membrane 40.85 59.18
VIT_12s0028g01090.t01 Wine grape cytosol, peroxisome, plasma membrane 40.56 58.06
Solyc07g044880.2.1 Tomato mitochondrion 23.1 57.75
PGSC0003DMT400002449 Potato cytosol, nucleus, plasma membrane 40.28 56.3
GSMUA_Achr6P04560_001 Banana cytosol, peroxisome, plasma membrane 38.31 54.84
KRG99024 Soybean plasma membrane 40.28 54.17
Os03t0781700-01 Rice cytosol, peroxisome, plasma membrane 37.18 53.44
GSMUA_Achr9P10200_001 Banana cytosol, peroxisome, plasma membrane 35.49 52.07
Zm00001d034313_P001 Maize cytosol, nucleus, plasma membrane 36.06 51.61
PGSC0003DMT400074138 Potato plasma membrane 43.38 51.33
EER90788 Sorghum cytosol, nucleus, plasma membrane 35.21 50.61
TraesCS2D01G254800.1 Wheat cytosol, peroxisome, vacuole 34.93 50.2
Os07t0142000-01 Rice plasma membrane 34.65 50.0
TraesCS2A01G254300.1 Wheat cytosol, peroxisome, vacuole 34.37 49.39
Zm00001d018781_P001 Maize extracellular, mitochondrion 33.52 48.97
TraesCS5B01G420300.1 Wheat cytosol, nucleus, plasma membrane 35.21 48.26
TraesCS2B01G267800.2 Wheat cytosol, peroxisome, vacuole 33.52 48.18
TraesCS5D01G426200.1 Wheat cytosol, peroxisome, plasma membrane 34.65 47.49
HORVU5Hr1G101680.2 Barley cytosol, endoplasmic reticulum, peroxisome 34.65 47.13
TraesCS5A01G418200.1 Wheat cytosol, peroxisome, plasma membrane 34.65 47.13
KXG34376 Sorghum plasma membrane 37.75 42.68
CDX79993 Canola cytosol, peroxisome, plasma membrane 27.32 38.65
CDY42012 Canola cytosol, peroxisome, plasma membrane 27.04 38.25
CDY66516 Canola endoplasmic reticulum, extracellular 19.72 37.63
CDY62522 Canola cytosol 8.45 37.5
CDY53913 Canola cytosol, peroxisome, plasma membrane 26.48 37.01
CDY07184 Canola cytosol, peroxisome, plasma membrane 25.07 36.63
CDY52012 Canola cytosol, peroxisome, plasma membrane 26.2 36.61
CDY25557 Canola cytosol, endoplasmic reticulum, nucleus 25.63 36.26
CDY48510 Canola cytosol 24.51 35.8
CDY67571 Canola plasma membrane 22.54 35.71
CDY38194 Canola cytosol, nucleus, plasma membrane 25.07 35.6
CDY08353 Canola cytosol, endoplasmic reticulum, nucleus 25.07 35.6
CDY34396 Canola cytosol, endoplasmic reticulum, nucleus 25.07 35.46
CDX75962 Canola plasma membrane 22.25 35.27
CDY51936 Canola endoplasmic reticulum, peroxisome, plasma membrane 21.97 34.82
CDY13240 Canola cytosol, peroxisome, plasma membrane 15.49 34.16
CDY10954 Canola cytosol 25.92 34.07
HORVU2Hr1G060770.16 Barley plasma membrane 36.62 33.94
CDY57657 Canola cytosol, nucleus, plasma membrane 26.2 33.82
CDY44123 Canola cytosol, nucleus, plasma membrane 25.92 33.33
CDX90792 Canola cytosol, peroxisome, plasma membrane 25.07 33.33
CDY41666 Canola cytosol 25.35 32.61
CDY24806 Canola cytosol 25.07 32.48
CDY46172 Canola plastid 17.46 30.69
CDX67589 Canola golgi, plasma membrane, vacuole 17.18 30.05
CDY51584 Canola plasma membrane 16.9 29.56
CDX99221 Canola plasma membrane 16.9 29.56
CDX73507 Canola cytosol, golgi, plasma membrane 16.9 29.27
CDX78209 Canola golgi, plasma membrane, vacuole 16.9 29.27
CDY05135 Canola mitochondrion 25.35 28.75
CDY36282 Canola plasma membrane 18.03 28.7
CDY22970 Canola plasma membrane 15.77 28.57
CDX82294 Canola plastid 15.77 28.57
CDY22971 Canola plasma membrane 15.49 28.06
CDY00975 Canola cytosol, endoplasmic reticulum, peroxisome 18.87 28.03
CDY08567 Canola cytosol 18.59 27.39
CDX71213 Canola plasma membrane 15.21 26.6
CDY48222 Canola cytosol, endoplasmic reticulum, plasma membrane 15.21 26.6
CDX96038 Canola plasma membrane 15.77 26.54
CDX86802 Canola cytosol, nucleus, peroxisome 18.03 26.12
CDY01898 Canola plasma membrane 15.49 25.94
CDX81500 Canola plasma membrane 14.65 25.0
CDX76854 Canola plasma membrane 12.68 21.74
CDY46067 Canola plasma membrane 12.68 21.63
CDX89122 Canola extracellular, mitochondrion 9.01 20.91
CDY12701 Canola plasma membrane 14.93 17.55
Protein Annotations
MapMan:13.7.2.1GO:A0A078J305UniProt:A0A078J305EnsemblPlants:CDY56712ProteinID:CDY56712ProteinID:CDY56712.1
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00019947001InterPro:IPR003388PFAM:PF02453PFscan:PS50845
PANTHER:PTHR10994PANTHER:PTHR10994:SF62InterPro:ReticulonTMHMM:TMhelixUniParc:UPI0004EEA29ASEG:seg
Description
BnaC01g38700DReticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078J305]
Coordinates
chrLK033513:+:36052..38287
Molecular Weight (calculated)
40210.8 Da
IEP (calculated)
9.682
GRAVY (calculated)
0.083
Length
355 amino acids
Sequence
(BLAST)
001: MFMLCFSRRT MGAFDLINRK TIYGSSQSNV TSSTWAAESH PYTKLQTLPT FLRVSIQLSH LTNPIAFFSV QSFILCGSSL SESTSKKKEN FISVRFSETK
101: FFFTNSSRIM HEKNIVEDVI NDFVDNFTET VQKKKNVSFF EQDDTVSSRF NRMFGREKPI HHVLGGGKSA DVLLWRNKKI SASVLMGATA IWVLFEWINF
201: HFLSLVCYGL LLGMIVQFVW SNASGALNRS QSGVPRLVLP KDFFADVGVT VGTEVNRGLM FLQDLACRGS LKQFLMAAIG LWLAAMIGSC CNFLTVLYIG
301: FVGAHTMPVL YERYEDEVDG FVDSLLMKFH SHYKKMDTGF LSRIPSGRFG FKKRD
Best Arabidopsis Sequence Match ( AT3G10260.3 )
(BLAST)
001: MKSTFICKLS NLRFRLCFRI MPDKNIVEDV IGDLVDNFTE TVQKNKHGSS FFEQEDSVSS RFNRLFDRQK PIHHVLGGGK SADVLLWRNK KISASVLMGA
101: TAIWVLFEWI NFHFLSLVCY ALLLGMIAQF VWSNASGFLN RSQSRVPRLV LPKDFFAEVG VAVGKEVNRG LLFLQDLACK GNLKQFLMAV IGLWVAAMVG
201: SCCNFLTVLY IGFVGAHTMP VLYERYEDEV DGFMDSMIMK FHSHYKKLDT GFLSRIPSGK FGLKKRE
Arabidopsis Description
Reticulon family protein [Source:TAIR;Acc:AT3G10260]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.