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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG99024 Soybean plasma membrane 94.65 87.12
KRH73588 Soybean plasma membrane 74.9 74.29
KRH14529 Soybean cytosol, peroxisome, plasma membrane 74.49 73.88
VIT_12s0028g01090.t01 Wine grape cytosol, peroxisome, plasma membrane 67.49 66.13
GSMUA_Achr6P04560_001 Banana cytosol, peroxisome, plasma membrane 64.61 63.31
Solyc12g006290.1.1 Tomato nucleus 60.08 62.66
PGSC0003DMT400002449 Potato cytosol, nucleus, plasma membrane 62.96 60.24
EER90788 Sorghum cytosol, nucleus, plasma membrane 60.08 59.11
Os07t0142000-01 Rice plasma membrane 59.67 58.94
Os03t0781700-01 Rice cytosol, peroxisome, plasma membrane 59.67 58.7
TraesCS2D01G254800.1 Wheat cytosol, peroxisome, vacuole 59.26 58.3
Zm00001d034313_P001 Maize cytosol, nucleus, plasma membrane 59.26 58.06
Solyc07g044880.2.1 Tomato mitochondrion 33.74 57.75
Bra029827.1-P Field mustard plasma membrane 55.97 56.9
CDY08616 Canola plasma membrane 55.97 56.9
CDY00916 Canola plasma membrane 55.97 56.9
TraesCS2A01G254300.1 Wheat cytosol, peroxisome, vacuole 57.61 56.68
TraesCS2B01G267800.2 Wheat cytosol, peroxisome, vacuole 57.61 56.68
Zm00001d018781_P001 Maize extracellular, mitochondrion 54.73 54.73
GSMUA_Achr9P10200_001 Banana cytosol, peroxisome, plasma membrane 54.32 54.55
AT3G10260.3 Thale cress plasma membrane 59.67 54.31
HORVU5Hr1G101680.2 Barley cytosol, endoplasmic reticulum, peroxisome 57.61 53.64
TraesCS5B01G420300.1 Wheat cytosol, nucleus, plasma membrane 56.38 52.9
TraesCS5D01G426200.1 Wheat cytosol, peroxisome, plasma membrane 55.97 52.51
TraesCS5A01G418200.1 Wheat cytosol, peroxisome, plasma membrane 56.38 52.49
PGSC0003DMT400074138 Potato plasma membrane 61.73 50.0
KRH41254 Soybean cytosol, nucleus, plasma membrane 48.15 46.06
KRH59988 Soybean mitochondrion 48.15 46.06
KXG34376 Sorghum plasma membrane 56.79 43.95
KRH06560 Soybean endoplasmic reticulum 44.44 42.19
KRH40357 Soybean endoplasmic reticulum 44.03 41.63
KRH00872 Soybean endoplasmic reticulum 44.03 41.31
CDY56712 Canola mitochondrion 59.26 40.56
KRG91024 Soybean plasma membrane 33.33 39.71
KRH35899 Soybean plasma membrane 33.74 38.68
CDX82165 Canola endoplasmic reticulum, peroxisome, plasma membrane, plastid 39.09 38.31
KRH35738 Soybean endoplasmic reticulum 32.1 38.24
KRG99174 Soybean endoplasmic reticulum, plasma membrane 13.58 37.93
KRH39144 Soybean plasma membrane 34.16 37.39
KRH48561 Soybean plasma membrane 33.74 36.94
KRH35223 Soybean cytosol, nucleus, plasma membrane 37.86 36.8
HORVU2Hr1G060770.16 Barley plasma membrane 56.79 36.03
KRH18469 Soybean plasma membrane 29.22 35.86
KRG93546 Soybean plasma membrane 28.81 35.18
KRH48008 Soybean cytosol, peroxisome, plasma membrane 44.44 34.39
KRH75801 Soybean plasma membrane 26.75 31.1
KRH28521 Soybean endoplasmic reticulum 26.75 30.66
KRH66004 Soybean endoplasmic reticulum, golgi, plasma membrane 26.34 30.62
KRH30696 Soybean plasma membrane 30.04 29.67
KRH76938 Soybean endoplasmic reticulum, plasma membrane 18.11 27.33
KRG91601 Soybean mitochondrion 37.45 26.76
Protein Annotations
EntrezGene:100801782MapMan:13.7.2.1EMBL:ACUP02005301EnsemblPlantsGene:GLYMA_08G304100GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021
UniProt:I1KXW8InterPro:IPR003388EnsemblPlants:KRH45979ProteinID:KRH45979ProteinID:KRH45979.1ProteinID:KRH45980.1
PFAM:PF02453PFscan:PS50845PANTHER:PTHR10994PANTHER:PTHR10994:SF62InterPro:ReticulonTMHMM:TMhelix
UniParc:UPI00023389CFSEG:seg::::
Description
hypothetical protein
Coordinates
chr8:-:42243932..42248747
Molecular Weight (calculated)
27060.9 Da
IEP (calculated)
8.466
GRAVY (calculated)
0.209
Length
243 amino acids
Sequence
(BLAST)
001: MSEKTTAENL IENLVDTFVD KKKSVSFFED DKSDSVSSQI NRLFGRQKPV HHVLGGGKSA DVLLWRNKKI SASVLACATI AWVLFEWLNY NFLTILCFGL
101: VLVMLAQFLW SNASSMFNSS PSNVPRLVLP EELFLNIATV VGGKVNMGLR FLQDAACGGN LKQFLIVVGC LFAGAVIGSW CNFISVIYIG FVAAHTLPVL
201: YEKYEDEVDN FVYKVFGQMQ NQYRNLDASV LSKIPKGKGK KHE
Best Arabidopsis Sequence Match ( AT3G10260.1 )
(BLAST)
001: MPDKNIVEDV IGDLVDNFTE TVQKNKHGSS FFEQEDSVSS RFNRLFDRQK PIHHVLGGGK SADVLLWRNK KISASVLMGA TAIWVLFEWI NFHFLSLVCY
101: ALLLGMIAQF VWSNASGFLN RSQSRVPRLV LPKDFFAEVG VAVGKEVNRG LLFLQDLACK GNLKQFLMAV IGLWVAAMVG SCCNFLTVLY IGFVGAHTMP
201: VLYERYEDEV DGFMDSMIMK FHSHYKKLDT GFLSRIPSGK FGLKKRE
Arabidopsis Description
Reticulon family protein [Source:TAIR;Acc:AT3G10260]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.